RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 EPS8L1Q8TE68 723 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 WHAMMQ8TF30 809 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 SLC20A1Q8WUM9 679 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 EIF3CQ99613 913 aaKnown RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 CYP3A43Q9HB55 503 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 TBC1D13Q9NVG8 400 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 GDAP2Q9NXN4 497 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 KANSL3Q9P2N6 904 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 NOCTQ9UK39 431 aaKnown RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 PPP2R2CQ9Y2T4 447 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 A0A0U1RQJ8 604 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 DDX3XO00571 662 aaKnown RBP eCLIP13.72□□□□□ -0.21
RUNX1-213ENST00000469087 UPP2O95045 317 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 LCA5LO95447 670 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 ZNF132P52740 706 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 DSC1Q08554 894 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 SLC18A3Q16572 532 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 CD300LGQ6UXG3 332 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 CCAR2Q8N163 923 aaKnown RBP13.72□□□□□ -0.21
RUNX1-213ENST00000469087 RBBP8NLQ8NC74 664 aaPredicted RBP13.72□□□□□ -0.21
RUNX1-213ENST00000469087 SLC30A5Q8TAD4 765 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 ATRIPQ8WXE1 791 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 DDX1Q92499 740 aaKnown RBP13.72□□□□□ -0.21
RUNX1-213ENST00000469087 BADQ92934 168 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 ZNF560Q96MR9 790 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 AGPAT1Q99943 283 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 PRKAG2Q9UGJ0 569 aa13.72□□□□□ -0.21
RUNX1-213ENST00000469087 CHRNB2P17787 502 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 SV2CQ496J9 727 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 LIMS2Q7Z4I7 341 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 NPAS4Q8IUM7 802 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 GLYCTKQ8IVS8 523 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 REXO1L1PQ8IX06 675 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 COLGALT2Q8IYK4 626 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 C7orf61Q8IZ16 206 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 ABI1Q8IZP0 508 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 LNX1Q8TBB1 728 aaPredicted RBP13.71□□□□□ -0.21
RUNX1-213ENST00000469087 URGCPQ8TCY9 931 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 TOP1MTQ969P6 601 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
RUNX1-213ENST00000469087 TWNKQ96RR1 684 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 MRPL45Q9BRJ2 306 aaKnown RBP13.71□□□□□ -0.21
RUNX1-213ENST00000469087 IL23AQ9NPF7 189 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 KCND1Q9NSA2 647 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 HMGXB4Q9UGU5 601 aa13.71□□□□□ -0.21
RUNX1-213ENST00000469087 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.71□□□□□ -0.21
RUNX1-213ENST00000469087 CILPO75339 1184 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 B3GAT3O94766 335 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 MMEP08473 750 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 CCDC175P0C221 793 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 TNFAIP3P21580 790 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 RAD23BP54727 409 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 BPIFB4P59827 614 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 YWHAEP62258 255 aaKnown RBP13.71□□□□□ -0.22
RUNX1-213ENST00000469087 RNASELQ05823 741 aaKnown RBP13.71□□□□□ -0.22
RUNX1-213ENST00000469087 BMS1Q14692 1282 aaKnown RBP13.71□□□□□ -0.22
RUNX1-213ENST00000469087 TAF3Q5VWG9 929 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 PALB2Q86YC2 1186 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 PCDHB18PQ96TA0 734 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 DNAJB4Q9UDY4 337 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 NAGPAQ9UK23 515 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 BARX2Q9UMQ3 279 aaPredicted RBP13.71□□□□□ -0.22
RUNX1-213ENST00000469087 TFR2Q9UP52 801 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 NME7Q9Y5B8 376 aa13.71□□□□□ -0.22
RUNX1-213ENST00000469087 FNDC1Q4ZHG4 1894 aaPredicted RBP13.7□□□□□ -0.22
RUNX1-213ENST00000469087 LTBP2Q14767 1821 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 TBKBP1A7MCY6 615 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 F8W810 466 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 CYB561D2O14569 222 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 ABL1P00519 1130 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 ITGB1P05556 798 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 PFKMP08237 780 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 PDE6CP51160 858 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 NDST1P52848 882 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 DEFB103AP81534 67 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 FMO1Q01740 532 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 CDR2Q01850 454 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 INCA1Q0VD86 236 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 ORC1Q13415 861 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 SPA17Q15506 151 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 PAN2Q504Q3 1202 aaKnown RBP13.7□□□□□ -0.22
RUNX1-213ENST00000469087 DCLRE1AQ6PJP8 1040 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 OTOP2Q7RTS6 562 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 TMCO2Q7Z6W1 182 aaPredicted RBP13.7□□□□□ -0.22
RUNX1-213ENST00000469087 DNAAF5Q86Y56 855 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 SLC4A11Q8NBS3 891 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 APPL2Q8NEU8 664 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 KBTBD7Q8WVZ9 684 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 ZNF606Q8WXB4 792 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 SENP8Q96LD8 212 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 UROC1Q96N76 676 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 ZSWIM1Q9BR11 485 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 ELOVL4Q9GZR5 314 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 NRDE2Q9H7Z3 1164 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 HCSTQ9UBK5 93 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 L1RE1Q9UN81 338 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 PCDHA13Q9Y5I0 950 aa13.7□□□□□ -0.22
RUNX1-213ENST00000469087 RCCD1A6NED2 376 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms