RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 SGPP1Q9BX95 441 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 BOLA2Q9H3K6 86 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 RNPEPQ9H4A4 650 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 EPB41L4AQ9HCS5 686 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-207ENST00000467273 IL17RBQ9NRM6 502 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 MAP3K20Q9NYL2 800 aaKnown RBP6.27□□□□□ -1.41
PTCD3-207ENST00000467273 ADAM30Q9UKF2 790 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 PCDHB12Q9Y5F1 795 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 MRPL42Q9Y6G3 142 aaKnown RBP6.27□□□□□ -1.41
PTCD3-207ENST00000467273 MAP1BP46821 2468 aaKnown RBP6.27□□□□□ -1.41
PTCD3-207ENST00000467273 FAM208BQ5VWN6 2430 aa6.27□□□□□ -1.41
PTCD3-207ENST00000467273 ABCB11O95342 1321 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 PLXNA4Q9HCM2 1894 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 UPK3BL1B0FP48 263 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 PRR5-ARHGAP8B1AHC4 643 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 UPK3BL2E5RIL1 263 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 HMMRO75330 724 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 APPP05067 770 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 SMIM10L2AP0DMW4 78 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 SMIM10L2BP0DMW5 78 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 SNHG28P0DPA3 235 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 TOP1P11387 765 aaKnown RBP6.26□□□□□ -1.41
PTCD3-207ENST00000467273 NME1P15531 152 aaKnown RBP6.26□□□□□ -1.41
PTCD3-207ENST00000467273 SLC16A2P36021 539 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 ADAM17P78536 824 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 ARHGAP8P85298 464 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 PPARAQ07869 468 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 HSDL1Q3SXM5 330 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 ARSHQ5FYA8 562 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 GPATCH4Q5T3I0 446 aaKnown RBP6.26□□□□□ -1.41
PTCD3-207ENST00000467273 CWF19L1Q69YN2 538 aaKnown RBP6.26□□□□□ -1.41
PTCD3-207ENST00000467273 SYCE2Q6PIF2 218 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 TSHZ1Q6ZSZ6 1077 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 NLRC3Q7RTR2 1065 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 RBM23Q86U06 439 aaKnown RBP6.26□□□□□ -1.41
PTCD3-207ENST00000467273 IFNL3Q8IZI9 196 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 SAMD3Q8N6K7 520 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 GPATCH11Q8N954 259 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 C19orf47Q8N9M1 422 aaKnown RBP6.26□□□□□ -1.41
PTCD3-207ENST00000467273 VN1R2Q8NFZ6 395 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 CYP2W1Q8TAV3 490 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 CXorf38Q8TB03 319 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 SYTL5Q8TDW5 730 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-207ENST00000467273 CASP10Q92851 521 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 ADAM7Q9H2U9 754 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 NGRNQ9NPE2 291 aaKnown RBP6.26□□□□□ -1.41
PTCD3-207ENST00000467273 TCP11L1Q9NUJ3 509 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 TJP2Q9UDY2 1190 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 ZNF215Q9UL58 517 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-207ENST00000467273 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.26□□□□□ -1.41
PTCD3-207ENST00000467273 MSRB2Q9Y3D2 182 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 FANCMQ8IYD8 2048 aa6.26□□□□□ -1.41
PTCD3-207ENST00000467273 CCDC171Q6TFL3 1326 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 NRCAMQ92823 1304 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 WASH4PA8MWX3 477 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 B2RBV5 119 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 C2CD4DB7Z1M9 353 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 RNF113AO15541 343 aaKnown RBP6.25□□□□□ -1.41
PTCD3-207ENST00000467273 ORC4O43929 436 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 GJB6O95452 261 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 GGPS1O95749 300 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 CHRNA1P02708 482 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 CHGBP05060 677 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 LGALS2P05162 132 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 HSPD1P10809 573 aaKnown RBP6.25□□□□□ -1.41
PTCD3-207ENST00000467273 PDHBP11177 359 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 TECP42680 631 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 NT5C2P49902 561 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 GHRHRQ02643 423 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 ZNF543Q08ER8 600 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 LPIN1Q14693 890 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 ACAP1Q15027 740 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 FXNQ16595 210 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 ARHGEF16Q5VV41 709 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 CDCP2Q5VXM1 449 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 SDE2Q6IQ49 451 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 UNC5AQ6ZN44 842 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 TMEM151BQ8IW70 566 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 ITPRIPQ8IWB1 547 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 FTSJ3Q8IY81 847 aaKnown RBP6.25□□□□□ -1.41
PTCD3-207ENST00000467273 TDRD5Q8NAT2 981 aaKnown RBP6.25□□□□□ -1.41
PTCD3-207ENST00000467273 OSBP2Q969R2 916 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 TTC14Q96N46 770 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 TAAR1Q96RJ0 339 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 CCDC113Q9H0I3 377 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 NAPBQ9H115 298 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 CNNM2Q9H8M5 875 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 PUF60Q9UHX1 559 aaKnown RBP6.25□□□□□ -1.41
PTCD3-207ENST00000467273 ANAPC4Q9UJX5 808 aa6.25□□□□□ -1.41
PTCD3-207ENST00000467273 MYO10Q9HD67 2058 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 NOP56O00567 594 aaKnown RBP6.24□□□□□ -1.41
PTCD3-207ENST00000467273 TNFRSF10CO14798 259 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 PER2O15055 1255 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 STAM2O75886 525 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 FGF18O76093 207 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 DDAH1O94760 285 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 ADRB1P08588 477 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 CELA3BP08861 270 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 GHRP10912 638 aa6.24□□□□□ -1.41
PTCD3-207ENST00000467273 KIR3DL1P43629 444 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms