RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TKTP29401 623 aaKnown RBP17.17■□□□□ 0.34
GPC1-207ENST00000466624 ERVFC1P60507 584 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 TNNC1P63316 161 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 NOP14P78316 857 aaKnown RBP17.17■□□□□ 0.34
GPC1-207ENST00000466624 CREMQ03060 361 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 MRPL58Q14197 206 aaKnown RBP17.17■□□□□ 0.34
GPC1-207ENST00000466624 SMC1AQ14683 1233 aaKnown RBP17.17■□□□□ 0.34
GPC1-207ENST00000466624 PTPN14Q15678 1187 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 WDR72Q3MJ13 1102 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 WDR44Q5JSH3 913 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 RTP2Q5QGT7 225 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 KIAA1841Q6NSI8 718 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 ANKS3Q6ZW76 656 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 TMC7Q7Z402 723 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 LMO3Q8TAP4 145 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 TCF25Q9BQ70 676 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 OXCT2Q9BYC2 517 aaPredicted RBP17.17■□□□□ 0.34
GPC1-207ENST00000466624 FAM124BQ9H5Z6 455 aaPredicted RBP17.17■□□□□ 0.34
GPC1-207ENST00000466624 ENTPD7Q9NQZ7 604 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.17■□□□□ 0.34
GPC1-207ENST00000466624 MRPL17Q9NRX2 175 aaKnown RBP17.17■□□□□ 0.34
GPC1-207ENST00000466624 TAB2Q9NYJ8 693 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 SNX9Q9Y5X1 595 aa17.17■□□□□ 0.34
GPC1-207ENST00000466624 RFXAPO00287 272 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 LILRB3O75022 631 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 TACC1O75410 805 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 OAZ2O95190 189 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 GBP6Q6ZN66 633 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 EHBP1Q8NDI1 1231 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 LNX1Q8TBB1 728 aaPredicted RBP17.16■□□□□ 0.34
GPC1-207ENST00000466624 GAS2L1Q99501 681 aaPredicted RBP17.16■□□□□ 0.34
GPC1-207ENST00000466624 NIF3L1Q9GZT8 377 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 VPS16Q9H269 839 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 RXFP1Q9HBX9 757 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 FNIP2Q9P278 1114 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 L1RE1Q9UN81 338 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 BACE2Q9Y5Z0 518 aa17.16■□□□□ 0.34
GPC1-207ENST00000466624 LGALS16A8MUM7 142 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 H7C4K7 107 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 YWHAHQ04917 246 aaPredicted RBP17.15■□□□□ 0.34
GPC1-207ENST00000466624 EXOC3L4Q17RC7 722 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 SOWAHAQ2M3V2 549 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 VARS2Q5ST30 1063 aaKnown RBP17.15■□□□□ 0.34
GPC1-207ENST00000466624 FKBP15Q5T1M5 1219 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 SMYD5Q6GMV2 418 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 ZNF280DQ6N043 979 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 METTL23Q86XA0 190 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 CEP57Q86XR8 500 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 PDCL2Q8N4E4 241 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 MRPL43Q8N983 215 aaKnown RBP17.15■□□□□ 0.34
GPC1-207ENST00000466624 RIN2Q8WYP3 895 aaPredicted RBP17.15■□□□□ 0.34
GPC1-207ENST00000466624 PI4K2AQ9BTU6 479 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 BCO2Q9BYV7 579 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 CYP3A43Q9HB55 503 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 APOBEC3GQ9HC16 384 aaKnown RBP17.15■□□□□ 0.34
GPC1-207ENST00000466624 GCNT4Q9P109 453 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 MTRRQ9UBK8 725 aa17.15■□□□□ 0.34
GPC1-207ENST00000466624 CDH23Q9H251 3354 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 C2orf71A6NGG8 1288 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 GABRDO14764 452 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 TBC1D4O60343 1298 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 LRRN2O75325 713 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 CXCL14O95715 111 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 WARSP23381 471 aaKnown RBP17.14■□□□□ 0.33
GPC1-207ENST00000466624 IRS1P35568 1242 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 ASPAP45381 313 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 LHX1P48742 406 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 PSMD5Q16401 504 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 FILIP1LQ4L180 1135 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 PLPP4Q5VZY2 271 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 WSCD1Q658N2 575 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 OVOS1Q6IE37 1185 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 SPOPLQ6IQ16 392 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 ADGRF2Q8IZF7 708 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 DEFB123Q8N688 67 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 MICAL1Q8TDZ2 1067 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 B3GALT6Q96L58 329 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 FAM81BQ96LP2 452 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 NT5C1BQ96P26 610 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 MMS19Q96T76 1030 aa17.14■□□□□ 0.33
GPC1-207ENST00000466624 INTS2Q9H0H0 1204 aaKnown RBP17.14■□□□□ 0.33
GPC1-207ENST00000466624 NXF1Q9UBU9 619 aaKnown RBP17.14■□□□□ 0.33
GPC1-207ENST00000466624 MYO7AQ13402 2215 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 A0A1B0GTH6 734 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.13■□□□□ 0.33
GPC1-207ENST00000466624 PES1O00541 588 aaKnown RBP17.13■□□□□ 0.33
GPC1-207ENST00000466624 CLSTN1O94985 981 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 C1RP00736 705 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 TBXAS1P24557 533 aaPredicted RBP17.13■□□□□ 0.33
GPC1-207ENST00000466624 GCNT1Q02742 428 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 ADGRE1Q14246 886 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 SLC8B1Q6J4K2 584 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 TRIM65Q6PJ69 517 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 Q7L0L9 218 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 THEM5Q8N1Q8 247 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 TTC39CQ8N584 583 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 RNF214Q8ND24 703 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 KBTBD7Q8WVZ9 684 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 PPP2R3CQ969Q6 453 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 FAM161BQ96MY7 647 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms