RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 CLCNKBP51801 687 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 MLLT6P55198 1093 aaPredicted RBP9.36□□□□□ -0.91
DDR1-242ENST00000465966 ARPP19P56211 112 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 SATB1Q01826 763 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 MORC3Q14149 939 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 DCAF4L1Q3SXM0 396 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 AASDHQ4L235 1098 aaPredicted RBP9.36□□□□□ -0.91
DDR1-242ENST00000465966 L1TD1Q5T7N2 865 aaKnown RBP9.36□□□□□ -0.91
DDR1-242ENST00000465966 HAUS3Q68CZ6 603 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 CDCA2Q69YH5 1023 aaPredicted RBP9.36□□□□□ -0.91
DDR1-242ENST00000465966 ISM2Q6H9L7 571 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 SLC8B1Q6J4K2 584 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 MAP4K3Q8IVH8 894 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 YAF2Q8IY57 180 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 ZNF687Q8N1G0 1237 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 LEMD2Q8NC56 503 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 DEPTORQ8TB45 409 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 PIGOQ8TEQ8 1089 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 RAD54LQ92698 747 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 SMARCD2Q92925 531 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 E2F7Q96AV8 911 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 DDX27Q96GQ7 796 aaKnown RBP9.36□□□□□ -0.91
DDR1-242ENST00000465966 CDK5RAP3Q96JB5 506 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 ZNF512Q96ME7 567 aaPredicted RBP9.36□□□□□ -0.91
DDR1-242ENST00000465966 CBX8Q9HC52 389 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 KBTBD4Q9NVX7 518 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 STK17AQ9UEE5 414 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 GDAQ9Y2T3 454 aa9.36□□□□□ -0.91
DDR1-242ENST00000465966 WDR81Q562E7 1941 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 WDR27A2RRH5 827 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 CHURC1-FNTBB4DL54 471 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 ACKR2O00590 384 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 HRO43593 1189 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 GDF9O60383 454 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 ABLIM3O94929 683 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 SMC2O95347 1197 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 PRKCBP05771 671 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 SPATA31C1P0DKV0 1188 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 CHRNB1P11230 501 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 FCARP24071 287 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 FNTBP49356 437 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 KPNA1P52294 538 aaPredicted RBP9.35□□□□□ -0.91
DDR1-242ENST00000465966 YARSP54577 528 aaKnown RBP9.35□□□□□ -0.91
DDR1-242ENST00000465966 ROR1Q01973 937 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 MCM6Q14566 821 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 NAB2Q15742 525 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 UPP1Q16831 310 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 PRSS36Q5K4E3 855 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 DGKKQ5KSL6 1271 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 TPGS2Q68CL5 300 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 VITQ6UXI7 678 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 LUZP1Q86V48 1076 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 CATSPER3Q86XQ3 398 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 MFSD6LQ8IWD5 586 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 TCEAL8Q8IYN2 117 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 C12orf50Q8NA57 414 aaPredicted RBP9.35□□□□□ -0.91
DDR1-242ENST00000465966 LARP4BQ92615 738 aaKnown RBP9.35□□□□□ -0.91
DDR1-242ENST00000465966 TCEAL4Q96EI5 215 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 CCDC34Q96HJ3 373 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 GPR88Q9GZN0 384 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 SLITRK6Q9H5Y7 841 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 C8orf33Q9H7E9 229 aaPredicted RBP9.35□□□□□ -0.91
DDR1-242ENST00000465966 GPRC5CQ9NQ84 441 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 TOPORSQ9NS56 1045 aaPredicted RBP9.35□□□□□ -0.91
DDR1-242ENST00000465966 SLC38A7Q9NVC3 462 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 MAFFQ9ULX9 164 aa9.35□□□□□ -0.91
DDR1-242ENST00000465966 E9PMD0 336 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 SYN3O14994 580 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 KLRC4O43908 158 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 PAPSS2O95340 614 aaPredicted RBP9.34□□□□□ -0.91
DDR1-242ENST00000465966 RPN1P04843 607 aaKnown RBP9.34□□□□□ -0.91
DDR1-242ENST00000465966 RPA1P27694 616 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 BRCC3P46736 316 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 ZNF165P49910 485 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 EFNA5P52803 228 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 LIMK1P53667 647 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 DHX8Q14562 1220 aaKnown RBP9.34□□□□□ -0.91
DDR1-242ENST00000465966 IQCB1Q15051 598 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 PPP2R5AQ15172 486 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 GLRA4Q5JXX5 417 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 HEATR6Q6AI08 1181 aaKnown RBP9.34□□□□□ -0.91
DDR1-242ENST00000465966 DHX40Q8IX18 779 aaKnown RBP9.34□□□□□ -0.91
DDR1-242ENST00000465966 TRIML1Q8N9V2 468 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 ERMNQ8TAM6 284 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 ZSCAN18Q8TBC5 510 aaPredicted RBP9.34□□□□□ -0.91
DDR1-242ENST00000465966 PPP1R10Q96QC0 940 aaKnown RBP9.34□□□□□ -0.91
DDR1-242ENST00000465966 POLR3CQ9BUI4 534 aaPredicted RBP9.34□□□□□ -0.91
DDR1-242ENST00000465966 TRIM9Q9C026 710 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 TRPV4Q9HBA0 871 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 ASAH2Q9NR71 780 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 KIAA1024Q9UPX6 916 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 NUB1Q9Y5A7 615 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 INSL5Q9Y5Q6 135 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 WDR87Q6ZQQ6 2873 aa9.34□□□□□ -0.91
DDR1-242ENST00000465966 CACNA1IQ9P0X4 2223 aa9.33□□□□□ -0.92
DDR1-242ENST00000465966 ACACBO00763 2458 aa9.33□□□□□ -0.92
DDR1-242ENST00000465966 COL4A3Q01955 1670 aa9.33□□□□□ -0.92
DDR1-242ENST00000465966 SMIM28A0A1B0GU29 152 aa9.33□□□□□ -0.92
DDR1-242ENST00000465966 MYMKA6NI61 221 aa9.33□□□□□ -0.92
DDR1-242ENST00000465966 TTLL13PA6NNM8 815 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms