RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PPP1R13BQ96KQ4 1090 aa14.95□□□□□ -0.02
HDAC6-215ENST00000465457 CEP170P1Q96L14 293 aa14.95□□□□□ -0.02
HDAC6-215ENST00000465457 MAP7D2Q96T17 732 aa14.95□□□□□ -0.02
HDAC6-215ENST00000465457 TTYH3Q9C0H2 523 aa14.95□□□□□ -0.02
HDAC6-215ENST00000465457 CDV3Q9UKY7 258 aaKnown RBP14.95□□□□□ -0.02
HDAC6-215ENST00000465457 DAAM1Q9Y4D1 1078 aa14.95□□□□□ -0.02
HDAC6-215ENST00000465457 NUMBLQ9Y6R0 609 aa14.95□□□□□ -0.02
HDAC6-215ENST00000465457 TDRD15B5MCY1 1934 aaKnown RBP14.95□□□□□ -0.02
HDAC6-215ENST00000465457 ZMYM2Q9UBW7 1377 aa14.95□□□□□ -0.02
HDAC6-215ENST00000465457 RALGAPA1Q6GYQ0 2036 aa14.95□□□□□ -0.02
HDAC6-215ENST00000465457 TTC26A0AVF1 554 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 ZNF862O60290 1169 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 DDHD2O94830 711 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 ADRB1P08588 477 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 SPATA31D3P0C874 917 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 NMT1P30419 496 aaKnown RBP14.94□□□□□ -0.02
HDAC6-215ENST00000465457 HOXD13P35453 343 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 PSMC2P35998 433 aaKnown RBP14.94□□□□□ -0.02
HDAC6-215ENST00000465457 RFC5P40937 340 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 NCKAP1LP55160 1127 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 DMP1Q13316 513 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-215ENST00000465457 NOMO2Q5JPE7 1267 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 CEP135Q66GS9 1140 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 TSSK4Q6SA08 328 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 SPATA31D4Q6ZUB0 917 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 ANO5Q75V66 913 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 TAS1R1Q7RTX1 841 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 SYCP3Q8IZU3 236 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 CMASQ8NFW8 434 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-215ENST00000465457 NEK11Q8NG66 645 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 KCNN1Q92952 543 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 C16orf45Q96MC5 204 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-215ENST00000465457 SCLT1Q96NL6 688 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 EMILIN2Q9BXX0 1053 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 AGPAT3Q9NRZ7 376 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 SMG5Q9UPR3 1016 aaKnown RBP14.94□□□□□ -0.02
HDAC6-215ENST00000465457 SIK3Q9Y2K2 1263 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 FRMD4BQ9Y2L6 1034 aa14.94□□□□□ -0.02
HDAC6-215ENST00000465457 ZFYVE26Q68DK2 2539 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 GTPBP10A4D1E9 387 aaKnown RBP14.93□□□□□ -0.02
HDAC6-215ENST00000465457 F8W810 466 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 MAPK13O15264 365 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 TEX28O15482 410 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 TGFB1I1O43294 461 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 OATP04181 439 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 TNNT1P13805 278 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 HNRNPH3P31942 346 aaKnown RBP14.93□□□□□ -0.02
HDAC6-215ENST00000465457 GTF2BQ00403 316 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 PPP2R5AQ15172 486 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 MEA1Q16626 185 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 KIAA0319Q5VV43 1072 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 CCDC170Q8IYT3 715 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 NLRP7Q8WX94 980 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 SMG7Q92540 1137 aaKnown RBP14.93□□□□□ -0.02
HDAC6-215ENST00000465457 EEF2KMTQ96G04 330 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 NTPCRQ9BSD7 190 aaKnown RBP14.93□□□□□ -0.02
HDAC6-215ENST00000465457 NRBP2Q9NSY0 501 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 SPATA6Q9NWH7 488 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-215ENST00000465457 MARCH5Q9NX47 278 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 SEPT9Q9UHD8 586 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-215ENST00000465457 PPP2R2CQ9Y2T4 447 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 NOTCH4Q99466 2003 aa14.93□□□□□ -0.02
HDAC6-215ENST00000465457 ARID2Q68CP9 1835 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 TMEM150BA6NC51 233 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 SFI1A8K8P3 1242 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 ANHXE9PGG2 379 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 GAS2O43903 313 aaKnown RBP14.92□□□□□ -0.02
HDAC6-215ENST00000465457 STBD1O95210 358 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 IPO7O95373 1038 aaKnown RBP14.92□□□□□ -0.02
HDAC6-215ENST00000465457 AFPP02771 609 aaKnown RBP14.92□□□□□ -0.02
HDAC6-215ENST00000465457 CD72P21854 359 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 GPC5P78333 572 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 CSTF1Q05048 431 aaKnown RBP14.92□□□□□ -0.02
HDAC6-215ENST00000465457 RNASELQ05823 741 aaKnown RBP14.92□□□□□ -0.02
HDAC6-215ENST00000465457 GOLGA8FQ08AF8 430 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 GOLGA8DPQ0D2H9 430 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 PLA2G4FQ68DD2 849 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 TWF2Q6IBS0 349 aaKnown RBP14.92□□□□□ -0.02
HDAC6-215ENST00000465457 GLB1LQ6UWU2 654 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 HAUS6Q7Z4H7 955 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 FMNL3Q8IVF7 1028 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 FAM186BQ8IYM0 893 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 SYN2Q92777 582 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-215ENST00000465457 FGF14Q92915 247 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 IFT74Q96LB3 600 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 NIFKQ9BYG3 293 aaKnown RBP14.92□□□□□ -0.02
HDAC6-215ENST00000465457 SLC2A4RGQ9NR83 387 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 DMAC2Q9NW81 257 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 CEP72Q9P209 647 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 USP18Q9UMW8 372 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 PHLPP2Q6ZVD8 1323 aa14.92□□□□□ -0.02
HDAC6-215ENST00000465457 CEP295Q9C0D2 2601 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 SPTLC1O15269 473 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 AKAP3O75969 853 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 LAMP2P13473 410 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 CYLC1P35663 651 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-215ENST00000465457 STARD6P59095 220 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 ENPEPQ07075 957 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 ZC2HC1CQ53FD0 456 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-215ENST00000465457 PARM1Q6UWI2 310 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms