RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ENTPD1P49961 510 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 BCAP31P51572 246 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 HSD17B4P51659 736 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 EPHA4P54764 986 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 AMPD3Q01432 767 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 KCNMA1Q12791 1236 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 NCOA4Q13772 614 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TAF7Q15545 349 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TGFBIQ15582 683 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TAF12Q16514 161 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PARP6Q2NL67 630 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 C15orf59Q2T9L4 293 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 HSP90AA5PQ58FG0 334 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 WASHC2DQ5SRD0 308 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TTC39AQ5SRH9 613 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SPATA1Q5VX52 437 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SIGIRRQ6IA17 410 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CLEC4GQ6UXB4 293 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PPP1R21Q6ZMI0 780 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 Q6ZNB5 142 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 Q6ZNX1 250 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 C3orf62Q6ZUJ4 267 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CYP4V2Q6ZWL3 525 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 G2E3Q7L622 706 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 APTXQ7Z2E3 356 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ECHDC2Q86YB7 292 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SCYL3Q8IZE3 742 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TDHQ8IZJ6 230 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 BBS5Q8N3I7 341 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 Q8N9G6 341 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GSDMBQ8TAX9 411 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 RHPN1Q8TCX5 695 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PPP4R1Q8TF05 950 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CAPSLQ8WWF8 208 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 MAP4K1Q92918 833 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CEP63Q96MT8 703 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GSDMAQ96QA5 445 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GPATCH1Q9BRR8 931 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 UBAC1Q9BSL1 405 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 FSD1Q9BTV5 496 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 MKNK1Q9BUB5 465 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 RTFDC1Q9BY42 306 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 IFIH1Q9BYX4 1025 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 KLHL4Q9C0H6 718 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 LRMDAQ9H2I8 198 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 EBF3Q9H4W6 596 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SEC31BQ9NQW1 1179 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 KRT82Q9NSB4 513 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SCHIP1Q9P0W5 487 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 IP6K2Q9UHH9 426 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SERTAD1Q9UHV2 236 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TSPYL4Q9UJ04 414 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SLC12A7Q9Y666 1083 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 IKBKGQ9Y6K9 419 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CARMIL3Q8ND23 1372 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 SH3PXD2BA1X283 911 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 DAPK3O43293 454 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 ICMTO60725 284 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 USP1O94782 785 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 PSMG1O95456 288 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 CRYZL1O95825 349 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 INHAP05111 366 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 GNA11P29992 359 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 COPB2P35606 906 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 TNNC1P63316 161 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 CDR2Q01850 454 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 MGAT5Q09328 741 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 STK4Q13043 487 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 THOC5Q13769 683 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 GIT2Q14161 759 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 TTF1Q15361 905 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 ZNF423Q2M1K9 1284 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 CWF19L2Q2TBE0 894 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 DCAF6Q58WW2 860 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 ACSBG2Q5FVE4 666 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 ZBTB46Q86UZ6 589 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 NLRP10Q86W26 655 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 RASSF3Q86WH2 238 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 NME9Q86XW9 330 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 RASAL3Q86YV0 1011 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 NPAS3Q8IXF0 933 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 OR7G1Q8NGA0 311 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 EXD1Q8NHP7 514 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 IP6K1Q92551 441 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 MCUR1Q96AQ8 359 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 CENPTQ96BT3 561 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 EEF2KMTQ96G04 330 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 NEURL2Q9BR09 285 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 AP1M1Q9BXS5 423 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 MRPL9Q9BYD2 267 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 TANGO6Q9C0B7 1094 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 MTMR12Q9C0I1 747 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 THAP9Q9H5L6 903 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 CYLDQ9NQC7 956 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 UCKL1Q9NWZ5 548 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 DBR1Q9UK59 544 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 TRAF3IP3Q9Y228 551 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 RTCBQ9Y3I0 505 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 RABGAP1Q9Y3P9 1069 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 AOX1Q06278 1338 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms