RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 TMCO2Q7Z6W1 182 aaPredicted RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 DAAM2Q86T65 1068 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 USP37Q86T82 979 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 FAM228AQ86W67 206 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 CRIPAKQ8N1N5 446 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 TMEM161BQ8NDZ6 487 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 MCPH1Q8NEM0 835 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 SLC35G2Q8TBE7 412 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 PRPF31Q8WWY3 499 aaKnown RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 PSPC1Q8WXF1 523 aaKnown RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 SEC14L1Q92503 715 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 FAM81BQ96LP2 452 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 KRT12Q99456 494 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 NAP1L3Q99457 506 aaPredicted RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 CBWD1Q9BRT8 395 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 GCOM2Q9BZD3 368 aaPredicted RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 INO80BQ9C086 356 aaPredicted RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 NKX2-4Q9H2Z4 354 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 EPB41L5Q9HCM4 733 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 TBX20Q9UMR3 447 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 PACSIN2Q9UNF0 486 aaPredicted RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 INSL6Q9Y581 213 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 A0A087WZ62 844 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 MIF4GDA9UHW6 222 aaKnown RBP10.59□□□□□ -0.71
PTPRD-207ENST00000463477 TULP1O00294 542 aaPredicted RBP10.59□□□□□ -0.71
PTPRD-207ENST00000463477 RAD51CO43502 376 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 CEP104O60308 925 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 SHOX2O60902 331 aaPredicted RBP10.59□□□□□ -0.71
PTPRD-207ENST00000463477 HSF2BPO75031 334 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 IVLP07476 585 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 MXI1P50539 228 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 GYS2P54840 703 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 PEX3P56589 373 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 DLG4P78352 724 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 GUCY2DQ02846 1103 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 POU5F1BQ06416 359 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 DMP1Q13316 513 aaPredicted RBP10.59□□□□□ -0.71
PTPRD-207ENST00000463477 MXD4Q14582 209 aaPredicted RBP10.59□□□□□ -0.71
PTPRD-207ENST00000463477 EMC2Q15006 297 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 RHPN2Q8IUC4 686 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 FAM71AQ8IYT1 594 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 IQCKQ8N0W5 287 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 NLRP7Q8WX94 980 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 CASKIN2Q8WXE0 1202 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 TMEM143Q96AN5 459 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 MFSD14AQ96MC6 490 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 PPP1R16BQ96T49 567 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 FDXACB1Q9BRP7 624 aaPredicted RBP10.59□□□□□ -0.71
PTPRD-207ENST00000463477 TMEM117Q9H0C3 514 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 XPNPEP1Q9NQW7 623 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 CWC15Q9P013 229 aaKnown RBP10.59□□□□□ -0.71
PTPRD-207ENST00000463477 CHD9Q3L8U1 2897 aa10.59□□□□□ -0.71
PTPRD-207ENST00000463477 ERICH4A6NGS2 130 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 KIAA0391O15091 583 aaKnown RBP10.58□□□□□ -0.72
PTPRD-207ENST00000463477 SLC16A4O15374 487 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 DDX3YO15523 660 aaKnown RBP10.58□□□□□ -0.72
PTPRD-207ENST00000463477 BUB1BO60566 1050 aaPredicted RBP10.58□□□□□ -0.72
PTPRD-207ENST00000463477 ZC3H11AO75152 810 aaKnown RBP eCLIP10.58□□□□□ -0.72
PTPRD-207ENST00000463477 RTN2O75298 545 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 CA3P07451 260 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 GARTP22102 1010 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 ARL2P36404 184 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 HSPA9P38646 679 aaKnown RBP10.58□□□□□ -0.72
PTPRD-207ENST00000463477 NPTX2P47972 431 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 CARSP49589 748 aaKnown RBP10.58□□□□□ -0.72
PTPRD-207ENST00000463477 FAM189BP81408 668 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 LAMTOR4Q0VGL1 99 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 GRIN2CQ14957 1233 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 ZSCAN26Q16670 478 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 EMC10Q5UCC4 262 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 PPP2R2DQ66LE6 453 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 KRT39Q6A163 491 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 SMYD5Q6GMV2 418 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 LEKR1Q6ZMV7 388 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 SLC24A5Q71RS6 500 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 MAATS1Q7Z4T9 603 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 FAM76AQ8TAV0 307 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 PLEKHO2Q8TD55 490 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 PARD3BQ8TEW8 1205 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 LINC01599Q8WXQ3 324 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 SHC3Q92529 594 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 ZNF668Q96K58 619 aaPredicted RBP10.58□□□□□ -0.72
PTPRD-207ENST00000463477 FAM161BQ96MY7 647 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 CDX2Q99626 313 aaPredicted RBP10.58□□□□□ -0.72
PTPRD-207ENST00000463477 PCIF1Q9H4Z3 704 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 ATP6V0A4Q9HBG4 840 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 IFT122Q9HBG6 1241 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 TMEM8AQ9HCN3 771 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 UBE2TQ9NPD8 197 aaPredicted RBP10.58□□□□□ -0.72
PTPRD-207ENST00000463477 RGS18Q9NS28 235 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 C1orf112Q9NSG2 853 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 TTC3P53804 2025 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 MICAL3Q7RTP6 2002 aa10.58□□□□□ -0.72
PTPRD-207ENST00000463477 GOLGA6CA6NDK9 693 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 TMCO5BA8MYB1 307 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 MGEA5O60502 916 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 UPP2O95045 317 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 ADRB2P07550 413 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 GOLGA6DP0CG33 693 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 ADSSP30520 456 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms