RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 ARHGAP42A6NI28 874 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 SGK1O00141 431 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 FGFR1P11362 822 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 RFX1P22670 979 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 SSTR1P30872 391 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 APOBEC3HQ6NTF7 200 aaKnown RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 CCDC174Q6PII3 467 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 ZFAND2BQ8WV99 257 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 TRAPPC9Q96Q05 1148 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 FNBP1Q96RU3 617 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 PI4K2AQ9BTU6 479 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 TMEM120AQ9BXJ8 343 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 IQCGQ9H095 443 aaKnown RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 TAS2R1Q9NYW7 299 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 LARSQ9P2J5 1176 aaKnown RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 PDP2Q9P2J9 529 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 PPARGC1AQ9UBK2 798 aaKnown RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 TCEA3O75764 348 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 OCRLQ01968 901 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 AP3B2Q13367 1082 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 ZYXQ15942 572 aaKnown RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 ZNF568Q3ZCX4 644 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 C1orf146Q5VVC0 180 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 RIBC1Q8N443 379 aaPredicted RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 XXYLT1Q8NBI6 393 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 LMO3Q8TAP4 145 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 PYROXD1Q8WU10 500 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 ACSF2Q96CM8 615 aaPredicted RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 RBM17Q96I25 401 aaKnown RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 CLPTM1LQ96KA5 538 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 KREMEN1Q96MU8 473 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 C11orf70Q9BRQ4 267 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 ANGPTL2Q9UKU9 493 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 VAV3Q9UKW4 847 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 CYP1A2P05177 515 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 LYNP07948 512 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 NSFP46459 744 aaKnown RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 DYNLT1P63172 113 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 EFTUD2Q15029 972 aaKnown RBP eCLIP12.47□□□□□ -0.412e-6■■■□□ 19.1
TRAK1-206ENST00000449246 SYCP2LQ5T4T6 812 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 PALM2Q8IXS6 379 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 DENND1AQ8TEH3 1009 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 RILPQ96NA2 401 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 NACC1Q96RE7 527 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 WDR18Q9BV38 432 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 NDE1Q9NXR1 346 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 SLC17A7Q9P2U7 560 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 PSMC3IPQ9P2W1 217 aaPredicted RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 MARCOQ9UEW3 520 aaPredicted RBP12.47□□□□□ -0.41
TRAK1-206ENST00000449246 NUMBLQ9Y6R0 609 aa12.47□□□□□ -0.41
TRAK1-206ENST00000449246 CYP3A7-CYP3A51PA0A087WV96 503 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 PIK3CDO00329 1044 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 USP1O94782 785 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 POTEJP0CG39 1038 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 CYP3A7P24462 503 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 AP1B1Q10567 949 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 TBC1D25Q3MII6 688 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRAK1-206ENST00000449246 ATP13A4Q4VNC1 1196 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 ACAD10Q6JQN1 1059 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 CENPUQ71F23 418 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 SH3TC2Q8TF17 1288 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 OPTNQ96CV9 577 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 NT5C1BQ96P26 610 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 TUBGCP5Q96RT8 1024 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 CENPKQ9BS16 269 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 HSPBP1Q9NZL4 362 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 SENP1Q9P0U3 644 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 NOCTQ9UK39 431 aaKnown RBP12.46□□□□□ -0.41
TRAK1-206ENST00000449246 SERPINA10Q9UK55 444 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 DNPEPQ9ULA0 475 aa12.46□□□□□ -0.41
TRAK1-206ENST00000449246 TBX3O15119 743 aa12.46□□□□□ -0.42
TRAK1-206ENST00000449246 MAGEB2O15479 319 aa12.46□□□□□ -0.42
TRAK1-206ENST00000449246 PFDN1O60925 122 aa12.46□□□□□ -0.42
TRAK1-206ENST00000449246 NDUFB10O96000 172 aa12.46□□□□□ -0.42
TRAK1-206ENST00000449246 MYL2P10916 166 aa12.46□□□□□ -0.42
TRAK1-206ENST00000449246 DEUP1Q05D60 604 aa12.46□□□□□ -0.42
TRAK1-206ENST00000449246 BBS9Q3SYG4 887 aa12.46□□□□□ -0.42
TRAK1-206ENST00000449246 CEP128Q6ZU80 1094 aa12.46□□□□□ -0.42
TRAK1-206ENST00000449246 FAM71AQ8IYT1 594 aa12.46□□□□□ -0.42
TRAK1-206ENST00000449246 ZCCHC9Q8N567 271 aaKnown RBP12.46□□□□□ -0.42
TRAK1-206ENST00000449246 TUBB6Q9BUF5 446 aa12.46□□□□□ -0.42
TRAK1-206ENST00000449246 POLR3CQ9BUI4 534 aaPredicted RBP12.46□□□□□ -0.42
TRAK1-206ENST00000449246 STX18Q9P2W9 335 aaKnown RBP12.46□□□□□ -0.42
TRAK1-206ENST00000449246 TMEM150BA6NC51 233 aa12.45□□□□□ -0.42
TRAK1-206ENST00000449246 PRPF4O43172 522 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAK1-206ENST00000449246 HNRNPCL1O60812 293 aaKnown RBP12.45□□□□□ -0.42
TRAK1-206ENST00000449246 MT-ND3P03897 115 aa12.45□□□□□ -0.42
TRAK1-206ENST00000449246 MTMR2Q13614 643 aa12.45□□□□□ -0.42
TRAK1-206ENST00000449246 TFDP1Q14186 410 aa12.45□□□□□ -0.42
TRAK1-206ENST00000449246 MEX3CQ5U5Q3 659 aaKnown RBP12.45□□□□□ -0.42
TRAK1-206ENST00000449246 C3orf62Q6ZUJ4 267 aa12.45□□□□□ -0.42
TRAK1-206ENST00000449246 KBTBD2Q8IY47 623 aa12.45□□□□□ -0.42
TRAK1-206ENST00000449246 CCDC110Q8TBZ0 833 aa12.45□□□□□ -0.42
TRAK1-206ENST00000449246 CRYGNQ8WXF5 182 aa12.45□□□□□ -0.42
TRAK1-206ENST00000449246 NMD3Q96D46 503 aaKnown RBP12.45□□□□□ -0.42
TRAK1-206ENST00000449246 TTC25Q96NG3 672 aa12.45□□□□□ -0.42
TRAK1-206ENST00000449246 FAM111AQ96PZ2 611 aa12.45□□□□□ -0.42
TRAK1-206ENST00000449246 SMYD3Q9H7B4 428 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms