RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 WASHC2DQ5SRD0 308 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 C12orf60Q5U649 245 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 INTS5Q6P9B9 1019 aaKnown RBP9.65□□□□□ -0.86
SMC6-207ENST00000448223 C1orf228Q6PIY5 440 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 WDR59Q6PJI9 974 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 GIMAP8Q8ND71 665 aaPredicted RBP9.65□□□□□ -0.86
SMC6-207ENST00000448223 RPS6KC1Q96S38 1066 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 OLFM1Q99784 485 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 HMG20AQ9NP66 347 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 ARHGAP20Q9P2F6 1191 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 SLC13A4Q9UKG4 626 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 PSMD14O00487 310 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 SLC37A4O43826 429 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 PTGS2P35354 604 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 PSMC6P62333 389 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 DHX34Q14147 1143 aaKnown RBP9.65□□□□□ -0.86
SMC6-207ENST00000448223 MAPRE1Q15691 268 aaKnown RBP9.65□□□□□ -0.86
SMC6-207ENST00000448223 NEK10Q6ZWH5 1172 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 APTXQ7Z2E3 356 aaKnown RBP9.65□□□□□ -0.86
SMC6-207ENST00000448223 IRF2BP1Q8IU81 584 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 SPATA20Q8TB22 786 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 TMA16Q96EY4 203 aaKnown RBP9.65□□□□□ -0.86
SMC6-207ENST00000448223 VPS11Q9H270 941 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 RUBCNLQ9H714 662 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 MRPL47Q9HD33 250 aaKnown RBP9.65□□□□□ -0.86
SMC6-207ENST00000448223 IL17RBQ9NRM6 502 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 EMILIN3Q9NT22 766 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 FAM8A1Q9UBU6 413 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 HBS1LQ9Y450 684 aaKnown RBP9.65□□□□□ -0.86
SMC6-207ENST00000448223 MYH15Q9Y2K3 1946 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 TNFAIP8O95379 198 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 KLRC1P26715 233 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 CPA2P48052 419 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 SYCP2LQ5T4T6 812 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 CLVS1Q8IUQ0 354 aaPredicted RBP9.65□□□□□ -0.86
SMC6-207ENST00000448223 AMACRQ9UHK6 382 aa9.65□□□□□ -0.86
SMC6-207ENST00000448223 A6NJR5 290 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 O00370 1275 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 FKBP6O75344 327 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 MSL3P1P0C860 447 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 MYL7Q01449 175 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 RNF19BQ6ZMZ0 732 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 CCNYL1Q8N7R7 359 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 PPM1NQ8N819 430 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 SLC13A1Q9BZW2 595 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 SEMA6BQ9H3T3 888 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 PCIF1Q9H4Z3 704 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 RPRD1BQ9NQG5 326 aaKnown RBP9.65□□□□□ -0.87
SMC6-207ENST00000448223 C20orf96Q9NUD7 363 aaPredicted RBP9.65□□□□□ -0.87
SMC6-207ENST00000448223 DDX56Q9NY93 547 aaKnown RBP9.65□□□□□ -0.87
SMC6-207ENST00000448223 COPG2Q9UBF2 871 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 TELO2Q9Y4R8 837 aa9.65□□□□□ -0.87
SMC6-207ENST00000448223 KRT19P08727 400 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 CIITAP33076 1130 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 ATXN3P54252 364 aaPredicted RBP9.64□□□□□ -0.87
SMC6-207ENST00000448223 SLC34A1Q06495 639 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 TRADDQ15628 312 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 PPP6R3Q5H9R7 873 aaPredicted RBP9.64□□□□□ -0.87
SMC6-207ENST00000448223 GJB7Q6PEY0 223 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 P3H2Q8IVL5 708 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 DUSP9Q99956 384 aaKnown RBP9.64□□□□□ -0.87
SMC6-207ENST00000448223 DBR1Q9UK59 544 aaKnown RBP9.64□□□□□ -0.87
SMC6-207ENST00000448223 WDR37Q9Y2I8 494 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 PDZK1P1A8MUH7 402 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 KLHL41O60662 606 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 USP1O94782 785 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 UBOX5O94941 541 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 RHOBTB3O94955 611 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 MED26O95402 600 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 PLA2G4BP0C869 781 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 KRT20P35900 424 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 NAALADL2Q58DX5 795 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 FAM196AQ6ZSG2 479 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 LRRC49Q8IUZ0 686 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 GIPC3Q8TF64 312 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 MTMR8Q96EF0 704 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 CCSER2Q9H7U1 834 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 RRN3Q9NYV6 651 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 RABL2BQ9UNT1 228 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 INPP5FQ9Y2H2 1132 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 AIM2O14862 343 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 ADCY6O43306 1168 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 S100A6P06703 90 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 AKR1B1P15121 316 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 COASYQ13057 564 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 ARHGAP17Q68EM7 881 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 WDR93Q6P2C0 686 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 ANGPTL8Q6UXH0 198 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 PTF1AQ7RTS3 328 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 SLC17A8Q8NDX2 589 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 SCG3Q8WXD2 468 aaKnown RBP9.64□□□□□ -0.87
SMC6-207ENST00000448223 VPS39Q96JC1 886 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 SPEF1Q9Y4P9 236 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 SNTNA6NMZ2 147 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 ASAP2O43150 1006 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 SLC9A1P19634 815 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 PTK2BQ14289 1009 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 NKX1-1Q15270 411 aaPredicted RBP9.64□□□□□ -0.87
SMC6-207ENST00000448223 CRELD2Q6UXH1 353 aaPredicted RBP9.64□□□□□ -0.87
SMC6-207ENST00000448223 PRPF39Q86UA1 669 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms