RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 TRPS1Q9UHF7 1281 aa9.11□□□□□ -0.95
MCF2L2-203ENST00000447025 MED16Q9Y2X0 877 aa9.11□□□□□ -0.95
MCF2L2-203ENST00000447025 MROH1Q8NDA8 1641 aa9.11□□□□□ -0.95
MCF2L2-203ENST00000447025 H0Y626 953 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 BET1O15155 118 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 MTSS1O43312 755 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 USP1O94782 785 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 GLAP06280 429 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 CAPN1P07384 714 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 ACSL1P33121 698 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 RGS7P49802 495 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 RTP1P59025 263 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 NLRP11P59045 1033 aaKnown RBP9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 GNG2P59768 71 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 SCRN3Q0VDG4 424 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 CLUL1Q15846 466 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 AARS2Q5JTZ9 985 aaKnown RBP9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 NIPAL1Q6NVV3 410 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 PM20D2Q8IYS1 436 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 RIBC1Q8N443 379 aaPredicted RBP9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 SHC3Q92529 594 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 TTC9Q92623 222 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 ZNF333Q96JL9 665 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 NUDCD1Q96RS6 583 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 LIN7BQ9HAP6 207 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 ENOPH1Q9UHY7 261 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 PLA2R1Q13018 1463 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 POLR3AO14802 1390 aaPredicted RBP9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 A0A0G2JPF8 293 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 CTAGE15A4D2H0 777 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 HNRNPCL3B7ZW38 293 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 BCAR3O75815 825 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 NR3C2P08235 984 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 WEE2P0C1S8 567 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 CTAGE8P0CG41 777 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 HNRNPCL4P0DMR1 293 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 CDH3P22223 829 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 GTF2H1P32780 548 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 NUDT1P36639 197 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 RAD23BP54727 409 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 SLC12A2P55011 1212 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 BEX3Q00994 111 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 FOXK2Q01167 660 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 TTMPQ5BVD1 217 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 TMEM132EQ6IEE7 984 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 ARHGAP11AQ6P4F7 1023 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 PIK3AP1Q6ZUJ8 805 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 GALNT5Q7Z7M9 940 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 CTAGE6Q86UF2 777 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 CCDC28AQ8IWP9 274 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 UNC45BQ8IWX7 931 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 CTAGE4Q8IX94 777 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 CCDC36Q8IYA8 594 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 ENDOVQ8N8Q3 282 aaKnown RBP9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 SH3RF3Q8TEJ3 882 aaPredicted RBP9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 AFG1LQ8WV93 481 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 EXOC2Q96KP1 924 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 FRMD6Q96NE9 622 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 PLIN2Q99541 437 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 C19orf43Q9BQ61 176 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 HERPUD2Q9BSE4 406 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 DESI2Q9BSY9 194 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 RHOBTB2Q9BYZ6 727 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 CBY1Q9Y3M2 126 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 SYNMO15061 1565 aa9.1□□□□□ -0.95
MCF2L2-203ENST00000447025 A0A0U1RQJ8 604 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 ATP6V1G2-DDX39BF2Z307 99 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 TSPAN6O43657 245 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 ATP2C2O75185 946 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 GAS8O95995 478 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 ACTN1P12814 892 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 ZNF12P17014 697 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 PRKCAP17252 672 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 PKLRP30613 574 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 GALNSP34059 522 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 PCP4P48539 62 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 ST13P50502 369 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 SCNN1GP51170 649 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 GUCY1A3Q02108 690 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 RNASELQ05823 741 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 PLD1Q13393 1074 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 IDI1Q13907 227 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 RCN2Q14257 317 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 ACAP2Q15057 778 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 TXNRD1Q16881 649 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 CYP27C1Q4G0S4 372 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 SNAP47Q5SQN1 464 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 PRPF38BQ5VTL8 546 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 HHIPL2Q6UWX4 724 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 CCDC149Q6ZUS6 474 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 MIGA2Q7L4E1 593 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 SLC22A9Q8IVM8 553 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 PRCCQ92733 491 aaPredicted RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 TNFRSF25Q93038 417 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 DGCR14Q96DF8 476 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 FAM89AQ96GI7 184 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 MFSD14AQ96MC6 490 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 DDX50Q9BQ39 737 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 SIAEQ9HAT2 523 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 PLGRKTQ9HBL7 147 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms