RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 UTP11Q9Y3A2 253 aaKnown RBP27.35■■□□□ 1.97
CPNE1-216ENST00000437340 C2CD2Q9Y426 696 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 GOLGA6BA6NDN3 693 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 FAM187AA6NFU0 413 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 MEFVO15553 781 aaPredicted RBP27.34■■□□□ 1.97
CPNE1-216ENST00000437340 PROSCO94903 275 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 CALB1P05937 261 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 WEE2P0C1S8 567 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 ZNF865P0CJ78 1059 aaPredicted RBP27.34■■□□□ 1.97
CPNE1-216ENST00000437340 CHRNA3P32297 505 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 CDH5P33151 784 aaPredicted RBP27.34■■□□□ 1.97
CPNE1-216ENST00000437340 MAMLD1Q13495 774 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 APBB1IPQ7Z5R6 666 aaPredicted RBP27.34■■□□□ 1.97
CPNE1-216ENST00000437340 CD302Q8IX05 232 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 TMEM35BQ8NCS4 154 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 RAB17Q9H0T7 212 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 PARVAQ9NVD7 372 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 LCMT1Q9UIC8 334 aa27.34■■□□□ 1.97
CPNE1-216ENST00000437340 PHF2O75151 1096 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 KRT19P08727 400 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 EIF4BP23588 611 aaKnown RBP27.33■■□□□ 1.97
CPNE1-216ENST00000437340 MAP2K2P36507 400 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 CAP1Q01518 475 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 DCAF4L1Q3SXM0 396 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 OLFML2BQ68BL8 750 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 MMS22LQ6ZRQ5 1243 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 CXorf38Q8TB03 319 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 ADAMTS10Q9H324 1103 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 FAM114A2Q9NRY5 505 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 RNF186Q9NXI6 227 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 MTUS1Q9ULD2 1270 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 PCNTO95613 3336 aa27.33■■□□□ 1.97
CPNE1-216ENST00000437340 SMIM35A0A1B0GVV1 85 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 TTI1O43156 1089 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 TRPA1O75762 1119 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 SYF2O95926 243 aaKnown RBP27.32■■□□□ 1.96
CPNE1-216ENST00000437340 PRAMEF19Q5SWL8 479 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 CPNE8Q86YQ8 564 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 SLC13A5Q86YT5 568 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-216ENST00000437340 ACAP3Q96P50 834 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 CFHR5Q9BXR6 569 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 GCOM2Q9BZD3 368 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-216ENST00000437340 FAM124BQ9H5Z6 455 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-216ENST00000437340 ERVK-5Q9HDB9 667 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.32■■□□□ 1.96
CPNE1-216ENST00000437340 CASP8AP2Q9UKL3 1982 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 MBLAC1A4D2B0 266 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-216ENST00000437340 PAEPP09466 180 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 SMIM10L2AP0DMW4 78 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 SMIM10L2BP0DMW5 78 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 CYP2C19P33261 490 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 GRM5P41594 1212 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 DR1Q01658 176 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 AADACL2Q6P093 401 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 SCARA5Q6ZMJ2 495 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 TLK2Q86UE8 772 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-216ENST00000437340 KAT2BQ92831 832 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 RUNDC3BQ96NL0 473 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 CYP3A43Q9HB55 503 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 NXF1Q9UBU9 619 aaKnown RBP27.32■■□□□ 1.96
CPNE1-216ENST00000437340 Q9Y3F1 56 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 CEP83Q9Y592 693 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 KAT6AQ92794 2004 aa27.32■■□□□ 1.96
CPNE1-216ENST00000437340 AGPSO00116 658 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 STAU1O95793 577 aaKnown RBP27.31■■□□□ 1.96
CPNE1-216ENST00000437340 IGHA2P01877 340 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 ITGB3P05106 788 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 FAM153BP0C7A2 387 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 P4HA1P13674 534 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 BRD2P25440 801 aaKnown RBP27.31■■□□□ 1.96
CPNE1-216ENST00000437340 ECHS1P30084 290 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 MAN1A1P33908 653 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 GGCXP38435 758 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 TMEM132DQ14C87 1099 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 TRADDQ15628 312 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 CYP1B1Q16678 543 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 WDR72Q3MJ13 1102 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 FAM153CQ494X1 144 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 PRELID2Q8N945 189 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 TRIM7Q9C029 511 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 PCYOX1Q9UHG3 505 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 FAM153AQ9UHL3 310 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 ITGA11Q9UKX5 1188 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 GABRQQ9UN88 632 aa27.31■■□□□ 1.96
CPNE1-216ENST00000437340 HLTFQ14527 1009 aaKnown RBP eCLIP27.3■■□□□ 1.965e-8■■□□□ 14.2
CPNE1-216ENST00000437340 C2CD6Q53TS8 623 aa27.3■■□□□ 1.96
CPNE1-216ENST00000437340 PRDM10Q9NQV6 1147 aa27.3■■□□□ 1.96
CPNE1-216ENST00000437340 POLIQ9UNA4 740 aa27.3■■□□□ 1.96
CPNE1-216ENST00000437340 MED7O43513 233 aa27.3■■□□□ 1.96
CPNE1-216ENST00000437340 GPR32O75388 356 aa27.3■■□□□ 1.96
CPNE1-216ENST00000437340 CPT1AP50416 773 aa27.3■■□□□ 1.96
CPNE1-216ENST00000437340 SP3Q02447 781 aa27.3■■□□□ 1.96
CPNE1-216ENST00000437340 KIZQ2M2Z5 673 aa27.3■■□□□ 1.96
CPNE1-216ENST00000437340 ZNF394Q53GI3 561 aa27.3■■□□□ 1.96
CPNE1-216ENST00000437340 ADAT2Q7Z6V5 191 aaKnown RBP27.3■■□□□ 1.96
CPNE1-216ENST00000437340 TSEN2Q8NCE0 465 aaKnown RBP27.3■■□□□ 1.96
CPNE1-216ENST00000437340 FEZF2Q8TBJ5 459 aa27.3■■□□□ 1.96
CPNE1-216ENST00000437340 CELF4Q9BZC1 486 aaKnown RBP27.3■■□□□ 1.96
CPNE1-216ENST00000437340 LHX5Q9H2C1 402 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms