RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PPARGC1AQ9UBK2 798 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-202ENST00000433297 FCHO1O14526 889 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 ATP2A1O14983 1001 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 TYROBPO43914 113 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 MFAP3P55082 362 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 USP46P62068 366 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 TFDP1Q14186 410 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 RASSF3Q86WH2 238 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 ST13P4Q8IZP2 240 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 CCDC110Q8TBZ0 833 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 ECSITQ9BQ95 431 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 TUBB6Q9BUF5 446 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 NMUR2Q9GZQ4 415 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 CYLDQ9NQC7 956 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 MARCOQ9UEW3 520 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 DNPEPQ9ULA0 475 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 ARHGAP42A6NI28 874 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 BGNP21810 368 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 ARL4CP56559 192 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 RHBDL3P58872 404 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 RASA2Q15283 850 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 SHROOM1Q2M3G4 852 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 MEX3CQ5U5Q3 659 aaKnown RBP12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 ACAD10Q6JQN1 1059 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 RIPOR1Q6ZS17 1223 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 PASD1Q8IV76 773 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 LENG9Q96B70 501 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 ACSF2Q96CM8 615 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 DNAJC1Q96KC8 554 aaKnown RBP12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 TTC25Q96NG3 672 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 EBF3Q9H4W6 596 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 C10orf88Q9H8K7 445 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 DMAC2Q9NW81 257 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 SENP1Q9P0U3 644 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 ZBTB21Q9ULJ3 1066 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 LAMB1P07942 1786 aa12.18□□□□□ -0.46
HMGCS1-202ENST00000433297 CYP3A7-CYP3A51PA0A087WV96 503 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 RNASEH1O60930 286 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 GYS1P13807 737 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 RFX1P22670 979 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 CYP3A7P24462 503 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 CCNG2Q16589 344 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 FAM182AQ5T1J6 154 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 RGS9BPQ6ZS82 235 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 FAM71AQ8IYT1 594 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 ABTB1Q969K4 478 aaPredicted RBP12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 FAM20AQ96MK3 541 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 FAM111AQ96PZ2 611 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 PI4K2AQ9BTU6 479 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 SMYD3Q9H7B4 428 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 ZWILCHQ9H900 591 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 ATXN10Q9UBB4 475 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 CHMP2BQ9UQN3 213 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 MTA2O94776 668 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 OR6B1O95007 311 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 AP2B1P63010 937 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 CDK16Q00536 496 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 SYCP2LQ5T4T6 812 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 SCUBE1Q8IWY4 988 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 PYROXD1Q8WU10 500 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 SEMA4DQ92854 862 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 DNAAF2Q9NVR5 837 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 SERPINB13Q9UIV8 391 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 UMODL1Q5DID0 1318 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 ARHGEF35A5YM69 484 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 SGK1O00141 431 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 LPXNO60711 386 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 PGM3O95394 542 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 FDX1P10109 184 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 TAS2R40P59535 323 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 GAD2Q05329 585 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 SYDE2Q5VT97 1194 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 C3orf62Q6ZUJ4 267 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 CENPUQ71F23 418 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 ANKS1BQ7Z6G8 1248 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 SPATA24Q86W54 205 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 MPP4Q96JB8 637 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 NR1H4Q96RI1 486 aaPredicted RBP12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 VAV3Q9UKW4 847 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 PPM1HQ9ULR3 514 aa12.17□□□□□ -0.46
HMGCS1-202ENST00000433297 C6orf229H3BNL8 230 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 FAM200BP0CF97 657 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 PSMC4P43686 418 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 GEMIN4P57678 1058 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 CENPCQ03188 943 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 GSTA3Q16772 222 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 MARK2Q7KZI7 788 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 SATL1Q86VE3 508 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 RBM15BQ8NDT2 890 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 PYDC1Q8WXC3 89 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 JDP2Q8WYK2 163 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 DDX27Q96GQ7 796 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 OXNAD1Q96HP4 312 aaPredicted RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 RILPQ96NA2 401 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 TMEM165Q9HC07 324 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 PICK1Q9NRD5 415 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 MTO1Q9Y2Z2 717 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 RPS6KL1Q9Y6S9 549 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 CFBP00751 764 aa12.16□□□□□ -0.46
HMGCS1-202ENST00000433297 HARSP12081 509 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms