RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 MTMR2Q13614 643 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 BAATQ14032 418 aaPredicted RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 SMTNL2Q2TAL5 461 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 CYP4A22Q5TCH4 519 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 SWSAP1Q6NVH7 229 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 CDR2LQ86X02 465 aaPredicted RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 CHURC1Q8WUH1 139 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 SLCO2A1Q92959 643 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 CEP170P1Q96L14 293 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 RBM15Q96T37 977 aaKnown RBP eCLIP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 TRIM56Q9BRZ2 755 aaKnown RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 TMEM121Q9BTD3 319 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 MAK16Q9BXY0 300 aaKnown RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 KIAA1586Q9HCI6 787 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 SAYSD1Q9NPB0 183 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 PXMP2Q9NR77 195 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 HERC5Q9UII4 1024 aaKnown RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 MTUS1Q9ULD2 1270 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 IVNS1ABPQ9Y6Y0 642 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 WDR91A4D1P6 747 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 H0YIN7 160 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 P4HA2O15460 535 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 C4BPAP04003 597 aaKnown RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 CYP1A1P04798 512 aaPredicted RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 CCDC172P0C7W6 258 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 RFX1P22670 979 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 ERFP50548 548 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 GPX6P59796 221 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 COPS2P61201 443 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 DYNLT1P63172 113 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 OVGP1Q12889 678 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 SLMAPQ14BN4 828 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 DLGAP5Q15398 846 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 MTERF2Q49AM1 385 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 KCNT1Q5JUK3 1230 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 RSBN1LQ6PCB5 846 aaPredicted RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 TRMT10CQ7L0Y3 403 aaKnown RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 NLRX1Q86UT6 975 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 KIAA0319LQ8IZA0 1049 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 ARFGAP1Q8N6T3 406 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 SHKBP1Q8TBC3 707 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 PTPRN2Q92932 1015 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 TMEM106CQ9BVX2 250 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 OSBPL8Q9BZF1 889 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 POLR3FQ9H1D9 316 aaPredicted RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 PDLIM7Q9NR12 457 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 ANKFY1Q9P2R3 1169 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 UVRAGQ9P2Y5 699 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 SEPT9Q9UHD8 586 aaPredicted RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 HAO1Q9UJM8 370 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 CLUHO75153 1309 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 RASA4BC9J798 803 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 WNT10BO00744 389 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 RASA4O43374 803 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 PROSCO94903 275 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 GGPS1O95749 300 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 ALADP13716 330 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 KCNA2P16389 499 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 ATF7P17544 494 aaPredicted RBP7.6□□□□□ -1.19
COL28A1-202ENST00000430711 BRD2P25440 801 aaKnown RBP7.6□□□□□ -1.19
COL28A1-202ENST00000430711 SSTR1P30872 391 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 MAGEA4P43358 317 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 PSMC5P62195 406 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 FKBP1AP62942 108 aaKnown RBP7.6□□□□□ -1.19
COL28A1-202ENST00000430711 CENPCQ03188 943 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 MYBPC2Q14324 1141 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 NEDD9Q14511 834 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 ZNF268Q14587 947 aaPredicted RBP7.6□□□□□ -1.19
COL28A1-202ENST00000430711 MAPK6Q16659 721 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 FNBP1LQ5T0N5 605 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 RFWD3Q6PCD5 774 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 SCARA5Q6ZMJ2 495 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 IGDCC3Q8IVU1 814 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 C4orf19Q8IY42 314 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 AGGF1Q8N302 714 aaeCLIP7.6□□□□□ -1.19
COL28A1-202ENST00000430711 WDTC1Q8N5D0 677 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 TTC8Q8TAM2 541 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 TFAP2BQ92481 460 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 KLHL29Q96CT2 875 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 TEPSINQ96N21 525 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 SERPINB12Q96P63 405 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 FAM167BQ9BTA0 163 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 TARS2Q9BW92 718 aaKnown RBP7.6□□□□□ -1.19
COL28A1-202ENST00000430711 ST6GALNAC4Q9H4F1 302 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 EBF2Q9HAK2 575 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 SLC38A10Q9HBR0 1119 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 ARHGEF3Q9NR81 526 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 CYTH4Q9UIA0 394 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 FEM1BQ9UK73 627 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 CEP83Q9Y592 693 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 LYPLA2O95372 231 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 ASMTLO95671 621 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 GJB1P08034 283 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 TNNI1P19237 187 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 IL1R2P27930 398 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 STX2P32856 288 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 RDXP35241 583 aaKnown RBP7.6□□□□□ -1.19
COL28A1-202ENST00000430711 TUBP50607 506 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 PRKCEQ02156 737 aa7.6□□□□□ -1.19
COL28A1-202ENST00000430711 DMP1Q13316 513 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms