RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 PPP1R37O75864 691 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 DCNP07585 359 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 NFICP08651 508 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 IDEP14735 1019 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 GARTP22102 1010 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 TUFMP49411 452 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 UBXN2BQ14CS0 331 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 VEPH1Q14D04 833 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 STK38Q15208 465 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 SV2CQ496J9 727 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 C1orf228Q6PIY5 440 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 ZNF852Q6ZMS4 543 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 FRMD5Q7Z6J6 570 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 CCDC65Q8IXS2 484 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 SYCP3Q8IZU3 236 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 CACTINQ8WUQ7 758 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 ZNF396Q96N95 335 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 ASB16Q96NS5 453 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 CLIC6Q96NY7 704 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 TRMT61BQ9BVS5 477 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 CUEDC2Q9H467 287 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 SLITRK6Q9H5Y7 841 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 BRD9Q9H8M2 597 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 DPP3Q9NY33 737 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 CEP72Q9P209 647 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 MTMR6Q9Y217 621 aa16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 ZFHX2Q9C0A1 2572 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 PTPRZ1P23471 2315 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-202ENST00000428361 MYMKA6NI61 221 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 ANKRD63C9JTQ0 380 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 MYL4P12829 197 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 PSMC3P17980 439 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 NASPP49321 788 aaPredicted RBP16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 GUCY2FP51841 1108 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 AMPD3Q01432 767 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 DUSP4Q13115 394 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 TPRG1Q6ZUI0 275 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 USP49Q70CQ1 688 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 MSANTD3Q96H12 275 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 PGLYRP2Q96PD5 576 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 GCNAQ96QF7 691 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 USP28Q96RU2 1077 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 FOXQ1Q9C009 403 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 TNMDQ9H2S6 317 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 TRPV4Q9HBA0 871 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 TRPV5Q9NQA5 729 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 DLGAP2Q9P1A6 1054 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 ZMYM5Q9UJ78 669 aa16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 R3HCC1Q9Y3T6 440 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-202ENST00000428361 MIA3Q5JRA6 1907 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 MTMR11A4FU01 709 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 LAMTOR5O43504 91 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 PPP6R2O75170 966 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 ARHGAP15Q53QZ3 475 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 FAM78AQ5JUQ0 283 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 TANGO2Q6ICL3 276 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 CENPPQ6IPU0 288 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 ASCL5Q7RTU5 278 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 ST13P5Q8NFI4 369 aaPredicted RBP16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 PSMG2Q969U7 264 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 DNAJC19Q96DA6 116 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 TCEAL4Q96EI5 215 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 IER2Q9BTL4 223 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 STRA6Q9BX79 667 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 LTB4R2Q9NPC1 389 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 PANK4Q9NVE7 773 aa16.71■□□□□ 0.27
CTDSP1-202ENST00000428361 FAM186AA6NE01 2351 aa16.71■□□□□ 0.26
CTDSP1-202ENST00000428361 RIF1Q5UIP0 2472 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 FRMD3A2A2Y4 597 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 FAM170BA6NMN3 283 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 CYB561D2O14569 222 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 ZNF263O14978 683 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 HSP90AA1P07900 732 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 OR4Q2P0C623 313 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 GLULP15104 373 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 TAF12Q16514 161 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 ZNF528Q3MIS6 628 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 FAM173BQ6P4H8 233 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 BRSK2Q8IWQ3 736 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 YAF2Q8IY57 180 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 DCP1BQ8IZD4 617 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 ZSCAN18Q8TBC5 510 aaPredicted RBP16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 SPPL2BQ8TCT7 592 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 KCNG4Q8TDN1 519 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 PYM1Q9BRP8 204 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 FAM213AQ9BRX8 229 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 FBXO4Q9UKT5 387 aa16.7■□□□□ 0.26
CTDSP1-202ENST00000428361 KPNA7A9QM74 516 aa16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 PPEF2O14830 753 aa16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 SPTLC2O15270 562 aa16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 YEATS4O95619 227 aa16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 LMNAP02545 664 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 FCARP24071 287 aa16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 CDC25CP30307 473 aa16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 CCR2P41597 374 aa16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 RPS9P46781 194 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 MLLT6P55198 1093 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 TSPY1Q01534 308 aa16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 PPP2R5DQ14738 602 aa16.69■□□□□ 0.26
CTDSP1-202ENST00000428361 SURF1Q15526 300 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms