RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 DNAAF5Q86Y56 855 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 TASP1Q9H6P5 420 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 ZFATQ9P243 1243 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 TBKBP1A7MCY6 615 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 KPNA1P52294 538 aaPredicted RBP13.8□□□□□ -0.2
SPG11-202ENST00000427534 EIF3BP55884 814 aaKnown RBP13.8□□□□□ -0.2
SPG11-202ENST00000427534 EML3Q32P44 896 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 RINLQ6ZS11 566 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 RASGRP2Q7LDG7 609 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 TMEM169Q96HH4 297 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 CENPKQ9BS16 269 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 STARD7Q9NQZ5 370 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 GPATCH2LQ9NWQ4 482 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 CHMP2BQ9UQN3 213 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 ANO9A1A5B4 782 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 PCDH8O95206 1070 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 EYA4O95677 639 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 KRT7P08729 469 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 AKAP5P24588 427 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 ADCY2Q08462 1091 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 LZTS3O60299 673 aaPredicted RBP13.8□□□□□ -0.2
SPG11-202ENST00000427534 CYP2C8P10632 490 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 RPS6P62753 249 aaKnown RBP13.8□□□□□ -0.2
SPG11-202ENST00000427534 KRT72Q14CN4 511 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 CHMP1BQ7LBR1 199 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 ANKRD13AQ8IZ07 590 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 C4orf33Q8N1A6 199 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 HPDLQ96IR7 371 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 MIF4GDA9UHW6 222 aaKnown RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 P4HA2O15460 535 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 CKMP06732 381 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 PDHBP11177 359 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 ACADMP11310 421 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 FGFR1P11362 822 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 WASHC5Q12768 1159 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 NAA30Q147X3 362 aaPredicted RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 ACOT1Q86TX2 421 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 GUF1Q8N442 669 aaKnown RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 SNF8Q96H20 258 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 CINPQ9BW66 212 aaPredicted RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 ADNPQ9H2P0 1102 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 KCNH7Q9NS40 1196 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 TXLNGQ9NUQ3 528 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 TECPR2O15040 1411 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 ARHGEF40Q8TER5 1519 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 VN1R5Q7Z5H4 357 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 DPP3Q9NY33 737 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 DONSONQ9NYP3 566 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 FBXO2Q9UK22 296 aaPredicted RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 ACTR2P61160 394 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 MDM2Q00987 491 aaPredicted RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 TBL3Q12788 808 aaKnown RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 FAM167BQ9BTA0 163 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 SMPD4Q9NXE4 827 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.79□□□□□ -0.2
SPG11-202ENST00000427534 ASS1P00966 412 aaKnown RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 HSPA8P11142 646 aaKnown RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 SLC8A1P32418 973 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 ZNF34Q8IZ26 560 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 ASAP3Q8TDY4 903 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 MOV10L1Q9BXT6 1211 aaKnown RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 SENP6Q9GZR1 1112 aaPredicted RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 POLLQ9UGP5 575 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 C3orf70A6NLC5 250 aaPredicted RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 ZNF197O14709 1029 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 USP11P51784 963 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 CDC16Q13042 620 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 XKR3Q5GH77 459 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 ICA1LQ8NDH6 482 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 SEPT8Q92599 483 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 DPF2Q92785 391 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 TMEM39AQ9NV64 488 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 CHCHD3Q9NX63 227 aaKnown RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 ERAP1Q9NZ08 941 aa13.79□□□□□ -0.2
SPG11-202ENST00000427534 LIMA1Q9UHB6 759 aaKnown RBP13.79□□□□□ -0.2
SPG11-202ENST00000427534 DCDC2CA8MYV0 355 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 GTF2A2P52657 109 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 ALDH6A1Q02252 535 aaKnown RBP13.78□□□□□ -0.2
SPG11-202ENST00000427534 EFEMP1Q12805 493 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 VPS72Q15906 364 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 SV2CQ496J9 727 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 DDI1Q8WTU0 396 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 EXOC4Q96A65 974 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 C17orf80Q9BSJ5 609 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 VCPKMTQ9H867 229 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 MAN1C1Q9NR34 630 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 KCNQ5Q9NR82 932 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 HLA-DRAP01903 254 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 PMS1P54277 932 aaKnown RBP13.78□□□□□ -0.2
SPG11-202ENST00000427534 TMC7Q7Z402 723 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 SETD4Q9NVD3 440 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 SPASTQ9UBP0 616 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 TBC1D12O60347 775 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 SH3BGRLO75368 114 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 BRAFP15056 766 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 ACO1P21399 889 aaKnown RBP13.78□□□□□ -0.2
SPG11-202ENST00000427534 DENND5BQ6ZUT9 1274 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 METTL16Q86W50 562 aaKnown RBP13.78□□□□□ -0.2
SPG11-202ENST00000427534 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 PIH1D1Q9NWS0 290 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms