RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 SNX9Q9Y5X1 595 aa12.91□□□□□ -0.34
HDLBP-215ENST00000427487 FHOD1Q9Y613 1164 aa12.91□□□□□ -0.34
HDLBP-215ENST00000427487 BZW2Q9Y6E2 419 aaKnown RBP12.91□□□□□ -0.34
HDLBP-215ENST00000427487 PDE4DIPQ5VU43 2346 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-215ENST00000427487 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-215ENST00000427487 C5orf67F2Z3F1 127 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 TULP1O00294 542 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-215ENST00000427487 PPEF2O14830 753 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 SPTLC1O15269 473 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 B4GALT3O60512 393 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 LRRN2O75325 713 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 KIF4AO95239 1232 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 RB1P06400 928 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 LINC00271P0C7V0 271 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 ACO1P21399 889 aaKnown RBP12.9□□□□□ -0.34
HDLBP-215ENST00000427487 IBSPP21815 317 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-215ENST00000427487 FECHP22830 423 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 WARSP23381 471 aaKnown RBP12.9□□□□□ -0.34
HDLBP-215ENST00000427487 ANXA13P27216 316 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 CASP14P31944 242 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 KRT9P35527 623 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 SOX5P35711 763 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 PRKCIP41743 596 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 PLCB3Q01970 1234 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 DRAP1Q14919 205 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-215ENST00000427487 TSR1Q2NL82 804 aaKnown RBP12.9□□□□□ -0.34
HDLBP-215ENST00000427487 C9orf50Q5SZB4 431 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 PDXDC1Q6P996 788 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 SLC39A11Q8N1S5 342 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 C3orf58Q8NDZ4 430 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 IGSF21Q96ID5 467 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 PAAF1Q9BRP4 392 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 GPR88Q9GZN0 384 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 PRO3102Q9H379 93 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 MARCH5Q9NX47 278 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 SPG21Q9NZD8 308 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 NXF1Q9UBU9 619 aaKnown RBP12.9□□□□□ -0.34
HDLBP-215ENST00000427487 DNAJB4Q9UDY4 337 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 LZTS1Q9Y250 596 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.34
HDLBP-215ENST00000427487 MRPL42Q9Y6G3 142 aaKnown RBP12.9□□□□□ -0.34
HDLBP-215ENST00000427487 CYB561D2O14569 222 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 CILPO75339 1184 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 TADA2AO75478 443 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 OAZ2O95190 189 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 PAEPP09466 180 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 FERP16591 822 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 FXR1P51114 621 aaKnown RBP eCLIP12.89□□□□□ -0.356e-6■■■□□ 17.2
HDLBP-215ENST00000427487 ZNF132P52740 706 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 RAB30Q15771 203 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 MEA1Q16626 185 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 SOWAHAQ2M3V2 549 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 PAN2Q504Q3 1202 aaKnown RBP12.89□□□□□ -0.35
HDLBP-215ENST00000427487 TIGD5Q53EQ6 642 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 SCARA3Q6AZY7 606 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 SPOPLQ6IQ16 392 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 DSTYKQ6XUX3 929 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-215ENST00000427487 RRAGAQ7L523 313 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 ZNF677Q86XU0 584 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 TDHQ8IZJ6 230 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 TC2NQ8N9U0 490 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 COLGALT1Q8NBJ5 622 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 CISHQ9NSE2 258 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 ABHD10Q9NUJ1 306 aa12.89□□□□□ -0.35
HDLBP-215ENST00000427487 ZNHIT6Q9NWK9 470 aaKnown RBP12.89□□□□□ -0.35
HDLBP-215ENST00000427487 FOXN3O00409 490 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-215ENST00000427487 GFPT2O94808 682 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 FGFR3P22607 806 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 PCSK1P29120 753 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 BMPR1AP36894 532 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 MLLT1Q03111 559 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-215ENST00000427487 UBE3AQ05086 875 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 LRMPQ12912 555 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 RAPGEF1Q13905 1077 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 MRPL58Q14197 206 aaKnown RBP12.88□□□□□ -0.35
HDLBP-215ENST00000427487 STILQ15468 1287 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 SFMBT2Q5VUG0 894 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 FUT10Q6P4F1 479 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 DDX53Q86TM3 631 aaKnown RBP12.88□□□□□ -0.35
HDLBP-215ENST00000427487 METTL23Q86XA0 190 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 ADGRF2Q8IZF7 708 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 CRYBG2Q8N1P7 616 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 PDCL2Q8N4E4 241 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 CCDC112Q8NEF3 446 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 TMEM169Q96HH4 297 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 TNIP3Q96KP6 325 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 MMS19Q96T76 1030 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 ACBD6Q9BR61 282 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 NT5C1AQ9BXI3 368 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 NLRC4Q9NPP4 1024 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 CHST7Q9NS84 486 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 L1RE1Q9UN81 338 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 SSX2IPQ9Y2D8 614 aa12.88□□□□□ -0.35
HDLBP-215ENST00000427487 PRG3Q9Y2Y8 225 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-215ENST00000427487 SSU72P8A0A1W2PR75 194 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 LINC01553A4QN01 128 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 LRRC53A6NM62 1247 aa12.87□□□□□ -0.35
HDLBP-215ENST00000427487 TNRC18O15417 2968 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms