RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 LZTS3O60299 673 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 MYL2P10916 166 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 PDIA5Q14554 519 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 RPAINQ86UA6 219 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 GAS2L3Q86XJ1 694 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 WDCPQ9H6R7 721 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 PRMT7Q9NVM4 692 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 CPSF1Q10570 1443 aaKnown RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ZC3H11AO75152 810 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 FKBP9O95302 570 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 GUCY1A2P33402 732 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ZNF177Q13360 481 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 UGP2Q16851 508 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 CENPPQ6IPU0 288 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ERAP2Q6P179 960 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 FKBP9P1Q75LS8 142 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 TMEM117Q9H0C3 514 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 SLC39A10Q9ULF5 831 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 IGSF9BQ9UPX0 1349 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 SLC11A2P49281 568 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ATN1P54259 1190 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 UBE3AQ05086 875 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 C10orf53Q8N6V4 93 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 CHST13Q8NET6 341 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 UCMAQ8WVF2 138 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 BPIFA3Q9BQP9 254 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 MRPL1Q9BYD6 325 aaKnown RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 SCUBE2Q9NQ36 999 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 PRDM15P57071 1507 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 NR3C2P08235 984 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 DARSP14868 501 aaKnown RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 MAPRE1Q15691 268 aaKnown RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 DEPDC1Q5TB30 811 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 CERKQ8TCT0 537 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ECT2Q9H8V3 914 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ZC3H7BQ9UGR2 993 aaKnown RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 IPPQ9Y573 584 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ESYT3A0FGR9 886 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 SLC16A3O15427 465 aaKnown RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ARHGEF9O43307 516 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 B3GAT3O94766 335 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 TRPC1P48995 793 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 INPP5AQ14642 412 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 STYK1Q6J9G0 422 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 RBBP8NLQ8NC74 664 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 FAM162AQ96A26 154 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 VCPKMTQ9H867 229 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 CRLS1Q9UJA2 301 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ITIH6Q6UXX5 1313 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 TTC26A0AVF1 554 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 TCF3P15923 654 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 SLC9A1P19634 815 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 WEE1P30291 646 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 SOX11P35716 441 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 TCF7P36402 384 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-205ENST00000418258 FMO5P49326 533 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 ARID5BQ14865 1188 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 NFKBIZQ9BYH8 718 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 SYNCRIPO60506 623 aaKnown RBP11.72□□□□□ -0.53
PTCH1-205ENST00000418258 CLASP2O75122 1294 aaKnown RBP11.72□□□□□ -0.53
PTCH1-205ENST00000418258 ITGB3P05106 788 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 C11orf74Q86VG3 221 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 CLEC4FQ8N1N0 589 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 ARRDC4Q8NCT1 418 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 LINC00116Q8NCU8 138 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 MAGI3Q5TCQ9 1506 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 VCAM1P19320 739 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 PDK1Q15118 436 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 VPS72Q15906 364 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 HIST2H2ACQ16777 129 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-205ENST00000418258 HIST2H2AA3Q6FI13 130 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 LRRC8BQ6P9F7 803 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 SPATS2LQ9NUQ6 558 aaKnown RBP11.72□□□□□ -0.53
PTCH1-205ENST00000418258 AMACRQ9UHK6 382 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 ENO1P06733 434 aaKnown RBP11.72□□□□□ -0.53
PTCH1-205ENST00000418258 VCLP18206 1134 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 RPS12P25398 132 aaKnown RBP11.72□□□□□ -0.53
PTCH1-205ENST00000418258 RFX3P48380 749 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 E4F1Q66K89 784 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-205ENST00000418258 HORMAD1Q86X24 394 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 ATP6V0D2Q8N8Y2 350 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 MS4A14Q96JA4 679 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 NDEL1Q9GZM8 345 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 IQGAP3Q86VI3 1631 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 GMNCA6NCL1 334 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 SLC16A1P53985 500 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 ANKS6Q68DC2 871 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 PNPLA7Q6ZV29 1317 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 NT5DC4Q86YG4 428 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 DIS3LQ8TF46 1054 aaKnown RBP11.72□□□□□ -0.53
PTCH1-205ENST00000418258 EXTL3O43909 919 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 PDHBP11177 359 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 EFHC1Q5JVL4 640 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 UGT3A1Q6NUS8 523 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 CALML6Q8TD86 181 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 KRT35Q92764 455 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 KIF2CQ99661 725 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 DPP3Q9NY33 737 aa11.72□□□□□ -0.53
PTCH1-205ENST00000418258 NOP53Q9NZM5 478 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms