RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ZSWIM5Q9P217 1185 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 IFT80Q9P2H3 777 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 ATPIF1Q9UII2 106 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 CNOT6Q9ULM6 557 aaKnown RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 ANKRD6Q9Y2G4 727 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 SESN1Q9Y6P5 492 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 AP1M2Q9Y6Q5 423 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 PRR36Q9H6K5 1346 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 CARMIL1Q5VZK9 1371 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 A0A087X0M5 115 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 A0A1B0GUL7 405 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 A0A1B0GX30 115 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SLC12A8A0AV02 714 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 TMEM221A6NGB7 291 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 OR6C65A6NJZ3 312 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ENO4A6NNW6 628 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 GOLGA8BA8MQT2 603 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 PSMD9O00233 223 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 MAPK13O15264 365 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 TLR3O15455 904 aaKnown RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SULT1B1O43704 296 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 LRRN2O75325 713 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SEMA7AO75326 666 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF189O75820 626 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SOAT2O75908 522 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ALDH1A2O94788 518 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ADCY5O95622 1261 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 PLGP00747 810 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ADRB2P07550 413 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ZFYP08048 801 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SCG2P13521 617 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 CSF2RAP15509 400 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 GAP43P17677 238 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 LAG3P18627 525 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 PLCG1P19174 1290 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 IL11P20809 199 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 IL10P22301 178 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 DNAJB1P25685 340 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 MAPK3P27361 379 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 RPL9P32969 192 aaKnown RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SLC16A2P36021 539 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 IL6STP40189 918 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 KIR3DL1P43629 444 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 AP3M2P53677 418 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 HADHBP55084 474 aaKnown RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 MRPS15P82914 257 aaKnown RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 TNFAIP2Q03169 654 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SLC14A1Q13336 389 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 STIM1Q13586 685 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 CUL2Q13617 745 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 BTG3Q14201 252 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 STAT4Q14765 748 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ALG11Q2TAA5 492 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 CWF19L2Q2TBE0 894 aaKnown RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SPATS1Q496A3 300 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 FBXO43Q4G163 708 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 AARDQ4LEZ3 155 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 XKR9Q5GH70 373 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 RALGPS1Q5JS13 557 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 TCTE1Q5JU00 501 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 TMEM201Q5SNT2 666 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 TMEM240Q5SV17 173 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 OR7E24Q6IFN5 339 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 NEK5Q6P3R8 708 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 C6orf89Q6UWU4 347 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 PDZD4Q76G19 769 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 TMC6Q7Z403 805 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 KRT73Q86Y46 540 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 TMTC1Q8IUR5 882 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 P3H2Q8IVL5 708 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 MAML2Q8IZL2 1156 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 OR8H3Q8N146 312 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SPC24Q8NBT2 197 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 OR6P1Q8NGX9 317 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 OR8K3Q8NH51 312 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 MOSPD2Q8NHP6 518 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 GOT1L1Q8NHS2 421 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 BCAS4Q8TDM0 211 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 FAM216AQ8WUB2 273 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 CYB5D2Q8WUJ1 264 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 GATAD2BQ8WXI9 593 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 MYLIPQ8WY64 445 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SGK3Q96BR1 496 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 EAF1Q96JC9 268 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ZC3H10Q96K80 434 aaKnown RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ATP6V1G3Q96LB4 118 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 CCDC138Q96M89 665 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 TMEM74Q96NL1 305 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ACAP3Q96P50 834 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 WDR24Q96S15 920 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 RIOK1Q9BRS2 568 aaKnown RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 RSRP1Q9BUV0 290 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ARHGAP39Q9C0H5 1083 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 PSTPIP2Q9H939 334 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 FANCEQ9HB96 536 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF277Q9NRM2 450 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-203ENST00000414174 SERINC1Q9NRX5 453 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 TBCCD1Q9NVR7 557 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 KBTBD4Q9NVX7 518 aa3.91□□□□□ -1.78
SF3B1-203ENST00000414174 MOCS1Q9NZB8 636 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms