RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PSMC1P62191 440 aaKnown RBP4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 CXADRP78310 365 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 HSD11B2P80365 405 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 DGCR2P98153 550 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 PURAQ00577 322 aaKnown RBP4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 TAP2Q03519 686 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 ZNF844Q08AG5 666 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 SEMA5AQ13591 1074 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 CRB2Q5IJ48 1285 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 RNF220Q5VTB9 566 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 FNDC7Q5VTL7 733 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 CCSAPQ6IQ19 270 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 FOXR2Q6PJQ5 311 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 APOA5Q6Q788 366 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 CCDC149Q6ZUS6 474 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 CELF5Q8N6W0 485 aaKnown RBP4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 SLC17A8Q8NDX2 589 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 LRTOMTQ8WZ04 291 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 HAS1Q92839 578 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 ZSWIM1Q9BR11 485 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 ZNF747Q9BV97 191 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 TRIM54Q9BYV2 358 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 BHMT2Q9H2M3 363 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 SLAMF7Q9NQ25 335 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 RNF181Q9P0P0 153 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 CTTNBP2NLQ9P2B4 639 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 STAP2Q9UGK3 403 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 USP25Q9UHP3 1055 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 CPA4Q9UI42 421 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 HS3ST4Q9Y661 456 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 AATKQ6ZMQ8 1374 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 CCDC195A0A1B0GUA6 201 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 A0A1W2PS29 197 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 CFAP69A5D8W1 941 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 ISM1B1AKI9 464 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 DNAJB5O75953 348 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 NDUFA10O95299 355 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 INSRRP14616 1297 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 KCNA2P16389 499 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 FDXRP22570 491 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 DDX6P26196 483 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 PHKA1P46020 1223 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 MXRA7P84157 204 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 POLD3Q15054 466 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 CYP2A13Q16696 494 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 KIAA0753Q2KHM9 967 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 ZXDCQ2QGD7 858 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 LSM12Q3MHD2 195 aaKnown RBP4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 TAPT1Q6NXT6 567 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 TMPRSS9Q7Z410 1059 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 USP37Q86T82 979 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 COL23A1Q86Y22 540 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 ARHGEF19Q8IW93 802 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 KRT78Q8N1N4 520 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 CPEB3Q8NE35 698 aaKnown RBP4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 POC1BQ8TC44 478 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 ZNF483Q8TF39 744 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 APIPQ96GX9 242 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 SUCLG2Q96I99 432 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 ADAM2Q99965 735 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 VPS11Q9H270 941 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 ETAA1Q9NY74 926 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 TPCN1Q9ULQ1 816 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 AGAP1Q9UPQ3 857 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 CDYLQ9Y232 598 aa4.78□□□□□ -1.64
HMGB1P11-201ENST00000413899 NARSO43776 548 aaKnown RBP4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 ABHD16AO95870 558 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 PIM1P11309 404 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 MYF5P13349 255 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 PHKG2P15735 406 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 RPL17P18621 184 aaKnown RBP4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 RESTQ13127 1097 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 SPDYE7PQ495Y7 208 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 FAM160B1Q5W0V3 765 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 SP5Q6BEB4 398 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 MRGPREQ86SM8 312 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 SYNE4Q8N205 404 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 LRIG1Q96JA1 1093 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 TRIB1Q96RU8 372 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 SMOQ99835 787 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 BTBD1Q9H0C5 482 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 NRDE2Q9H7Z3 1164 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 ARNT2Q9HBZ2 717 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 GALNT9Q9HCQ5 603 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 SLC2A4RGQ9NR83 387 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 RGS17Q9UGC6 210 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 PLEKHM1Q9Y4G2 1056 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 PAXBP1Q9Y5B6 917 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 NOX1Q9Y5S8 564 aa4.77□□□□□ -1.65
HMGB1P11-201ENST00000413899 PRAMEF33A0A0G2JMD5 474 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 CENPVL1A0A0U1RR11 272 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 POLRMTO00411 1230 aaKnown RBP4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 TBX3O15119 743 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 MGEA5O60502 916 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 PRAMEF10O60809 474 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 ERN1O75460 977 aaKnown RBP4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 SOAT2O75908 522 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms