RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 CENPCQ03188 943 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 MTF1Q14872 753 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 PABPC5Q96DU9 382 aaKnown RBP18.13■□□□□ 0.49
PHRF1-202ENST00000413872 STARD7Q9NQZ5 370 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 B3GAT3O94766 335 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 SESN2P58004 480 aaPredicted RBP18.12■□□□□ 0.49
PHRF1-202ENST00000413872 TRADDQ15628 312 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 TRIM68Q6AZZ1 485 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 C3orf67Q6ZVT6 689 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 ABHD16BQ9H3Z7 469 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 EML4Q9HC35 981 aaKnown RBP18.12■□□□□ 0.49
PHRF1-202ENST00000413872 ARHGEF28Q8N1W1 1705 aaKnown RBP18.12■□□□□ 0.49
PHRF1-202ENST00000413872 H3BRB1 525 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 F9P00740 461 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 FASTKD1Q53R41 847 aaKnown RBP18.12■□□□□ 0.49
PHRF1-202ENST00000413872 TUT1Q9H6E5 874 aaKnown RBP18.12■□□□□ 0.49
PHRF1-202ENST00000413872 RAB6BQ9NRW1 208 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 ESYT3A0FGR9 886 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 ATICP31939 592 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 RAB27AP51159 221 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 RPL10AP62906 217 aaKnown RBP18.12■□□□□ 0.49
PHRF1-202ENST00000413872 BYSLQ13895 437 aaKnown RBP18.12■□□□□ 0.49
PHRF1-202ENST00000413872 ARHGEF7Q14155 803 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 DDX27Q96GQ7 796 aaKnown RBP18.12■□□□□ 0.49
PHRF1-202ENST00000413872 AGXT2Q9BYV1 514 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 ZNF518BQ9C0D4 1074 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 ANP32DO95626 131 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 APRTP07741 180 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 GIT2Q14161 759 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 PGM5Q15124 567 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 C10orf120Q5SQS8 335 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 SDE2Q6IQ49 451 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 GRAMD1AQ96CP6 724 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
PHRF1-202ENST00000413872 KIFC3Q9BVG8 833 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 NDE1Q9NXR1 346 aa18.12■□□□□ 0.49
PHRF1-202ENST00000413872 TPX2Q9ULW0 747 aaKnown RBP18.12■□□□□ 0.49
PHRF1-202ENST00000413872 F5H423 210 aaPredicted RBP18.11■□□□□ 0.49
PHRF1-202ENST00000413872 HIST1H2AGP0C0S8 130 aaPredicted RBP18.11■□□□□ 0.49
PHRF1-202ENST00000413872 NCAM1P13591 858 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 HIST1H2ADP20671 130 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 THEMIS2Q5TEJ8 643 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 HIST1H2AHQ96KK5 128 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 HIST1H2AJQ99878 128 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 H2AFJQ9BTM1 129 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 CYP3A43Q9HB55 503 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.11■□□□□ 0.491e-6■□□□□ 10.4
PHRF1-202ENST00000413872 CFAP99D6REC4 459 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 SLC11A2P49281 568 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 ACAD10Q6JQN1 1059 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 BTBD6Q96KE9 485 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 DPP7Q9UHL4 492 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 INHBEP58166 350 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 PTK2BQ14289 1009 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 TEDDM1Q5T9Z0 273 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 FBXL5Q9UKA1 691 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 RALBP11234 206 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 ARHGDIAP52565 204 aa18.11■□□□□ 0.49
PHRF1-202ENST00000413872 APOBEC3HQ6NTF7 200 aaKnown RBP18.11■□□□□ 0.49
PHRF1-202ENST00000413872 USP13Q92995 863 aaPredicted RBP18.11■□□□□ 0.49
PHRF1-202ENST00000413872 FRMD8P1Q9BZ68 369 aaPredicted RBP18.11■□□□□ 0.49
PHRF1-202ENST00000413872 MAPRE2Q15555 327 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 TAF2Q6P1X5 1199 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 WDR49Q8IV35 697 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 TC2NQ8N9U0 490 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 ATP6V1G3Q96LB4 118 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 KCNQ5Q9NR82 932 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 OLFML3Q9NRN5 406 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 AKR1A1P14550 325 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 MAP1SQ66K74 1059 aaPredicted RBP18.1■□□□□ 0.49
PHRF1-202ENST00000413872 UBA3Q8TBC4 463 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 PI4K2AQ9BTU6 479 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 FAM129AQ9BZQ8 928 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 ABI2Q9NYB9 513 aaPredicted RBP18.1■□□□□ 0.49
PHRF1-202ENST00000413872 AIPL1Q9NZN9 384 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 KANSL3Q9P2N6 904 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 THP07101 528 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 VIL1P09327 827 aaKnown RBP18.1■□□□□ 0.49
PHRF1-202ENST00000413872 COMTP21964 271 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 BRD2P25440 801 aaKnown RBP18.1■□□□□ 0.49
PHRF1-202ENST00000413872 GGCXP38435 758 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 GRIN1Q05586 938 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 SMG5Q9UPR3 1016 aaKnown RBP18.1■□□□□ 0.49
PHRF1-202ENST00000413872 SALL3Q9BXA9 1300 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 LHX1P48742 406 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 HP1BP3Q5SSJ5 553 aaPredicted RBP18.1■□□□□ 0.49
PHRF1-202ENST00000413872 KLHL11Q9NVR0 708 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 ZC3H7BQ9UGR2 993 aaKnown RBP18.1■□□□□ 0.49
PHRF1-202ENST00000413872 ALG6Q9Y672 507 aa18.1■□□□□ 0.49
PHRF1-202ENST00000413872 GYPCP04921 128 aa18.09■□□□□ 0.49
PHRF1-202ENST00000413872 ESRRGP62508 458 aa18.09■□□□□ 0.49
PHRF1-202ENST00000413872 FAM47EQ6ZV65 393 aa18.09■□□□□ 0.49
PHRF1-202ENST00000413872 RNF217Q8TC41 542 aa18.09■□□□□ 0.49
PHRF1-202ENST00000413872 GPRC5CQ9NQ84 441 aa18.09■□□□□ 0.49
PHRF1-202ENST00000413872 NDUFS3O75489 264 aa18.09■□□□□ 0.49
PHRF1-202ENST00000413872 FBXO21O94952 628 aa18.09■□□□□ 0.49
PHRF1-202ENST00000413872 ASMTLO95671 621 aa18.09■□□□□ 0.49
PHRF1-202ENST00000413872 LMNAP02545 664 aaKnown RBP18.09■□□□□ 0.49
PHRF1-202ENST00000413872 MAP4P27816 1152 aaKnown RBP18.09■□□□□ 0.49
PHRF1-202ENST00000413872 HADHAP40939 763 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms