RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 IMPG2Q9BZV3 1241 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 TINAGL1Q9GZM7 467 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 MS4A7Q9GZW8 240 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 CHST8Q9H2A9 424 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 A1CFQ9NQ94 594 aaKnown RBP5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 SLC39A10Q9ULF5 831 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 GTF2A1LQ9UNN4 478 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 TLR5O60602 858 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 FARP2O94887 1054 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 NDST3O95803 873 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 SLC6A2P23975 617 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 KLRC1P26715 233 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 PDIA3P30101 505 aaKnown RBP5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 LINC00310P59036 64 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 POU5F1BQ06416 359 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 PFKFB4Q16877 469 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 BMT2Q1RMZ1 405 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 AMOTQ4VCS5 1084 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 FKBP15Q5T1M5 1219 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 EFCAB12Q6NXP0 572 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 GPR135Q8IZ08 494 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 FITM2Q8N6M3 262 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 LINC01356Q8N9X3 169 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 FAM46DQ8NEK8 389 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 TMIEQ8NEW7 156 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 IPCEF1Q8WWN9 437 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 RAPGEF4Q8WZA2 1011 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 NEIL1Q96FI4 390 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 ZNF512Q96ME7 567 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 LRRC37BQ96QE4 947 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 PPP1R16BQ96T49 567 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 CPPED1Q9BRF8 314 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 GPR35Q9HC97 309 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 AGO4Q9HCK5 861 aaKnown RBP5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 OBP2BQ9NPH6 170 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 POGKQ9P215 609 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 XPR1Q9UBH6 696 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 OAZ3Q9UMX2 235 aa5.69□□□□□ -1.5
HMGB3P31-201ENST00000413333 A0A087WWL8 130 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 PMS2P1A4D2B8 440 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 MBD3L4A6NDZ8 208 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 MBD3L3A6NE82 208 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 GOLGA6L3A6NEY3 463 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 PRR5-ARHGAP8B1AHC4 643 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 NPIPB6E9PJ23 425 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 PODXLO00592 558 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 B4GALT3O60512 393 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 EIF5BO60841 1220 aaKnown RBP5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 VPS4BO75351 444 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 KIF20AO95235 890 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 CNOT4O95628 575 aaKnown RBP5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 ANXA1P04083 346 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 ITGB1P05556 798 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 IL1R1P14778 569 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 CR2P20023 1033 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 CCT5P48643 541 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 SLURP1P55000 103 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 PRR16Q569H4 304 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 BORAQ6PGQ7 559 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 ARHGEF18Q6ZSZ5 1173 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 FAM83AQ86UY5 434 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 Q8N3U1 123 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 SDR16C5Q8N3Y7 309 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 CCDC150Q8NCX0 1101 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 ZFP28Q8NHY6 868 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 DDX17Q92841 729 aaKnown RBP5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 SCAMP4Q969E2 229 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 SPSB4Q96A44 273 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 SLC38A3Q99624 504 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 PAGR1Q9BTK6 254 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 LSM14BQ9BX40 385 aaKnown RBP5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 PRDM16Q9HAZ2 1276 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 CD320Q9NPF0 282 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 MID2Q9UJV3 735 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 PNMA2Q9UL42 364 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 TBC1D30Q9Y2I9 924 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 PAXBP1Q9Y5B6 917 aa5.68□□□□□ -1.5
HMGB3P31-201ENST00000413333 FAM234BA2RU67 622 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 LGALS16A8MUM7 142 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 HNRNPDLO14979 420 aaKnown RBP5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 TXNP10599 105 aaKnown RBP5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 GNAT2P19087 354 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 KCNA10Q16322 511 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 ZACNQ401N2 412 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 ALFQ53S48 1182 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 ZDHHC24Q6UX98 284 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 CATSPERGQ6ZRH7 1159 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 MED25Q71SY5 747 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 YAF2Q8IY57 180 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 TBC1D20Q96BZ9 403 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 BORCS6Q96GS4 357 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 KLHL32Q96NJ5 620 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 LMF1Q96S06 567 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 RMDN3Q96TC7 470 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 MAF1Q9H063 256 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 CASS4Q9NQ75 786 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 MRPS18AQ9NVS2 196 aaKnown RBP5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 C9orf78Q9NZ63 289 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 GRHPRQ9UBQ7 328 aa5.67□□□□□ -1.5
HMGB3P31-201ENST00000413333 E9PLN8 166 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms