RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 TCF7P36402 384 aaPredicted RBP6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 MXI1P50539 228 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 GPC3P51654 580 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 PNLIPRP1P54315 467 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 SLC12A3P55017 1021 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 SLC26A5P58743 744 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 RPS16P62249 146 aaKnown RBP6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 ERVK-24P63145 666 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 CCT2P78371 535 aaKnown RBP6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 YWHAHQ04917 246 aaPredicted RBP6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 C19orf57Q0VDD7 668 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 ACAP1Q15027 740 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 GPR68Q15743 365 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 PCSK7Q16549 785 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 ARHGAP15Q53QZ3 475 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 PRAMEF14Q5SWL7 426 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 PRAMEF13Q5VWM6 474 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 FIGNL1Q6PIW4 674 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 SLC2A7Q6PXP3 512 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 OLFM4Q6UX06 510 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 ATF7IPQ6VMQ6 1270 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 MIGA2Q7L4E1 593 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 TMEM110Q86TL2 294 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 DZIP1Q86YF9 867 aaKnown RBP6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 ZFPM1Q8IX07 1006 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 GLIS1Q8NBF1 620 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 OR52K2Q8NGK3 314 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 OR6Y1Q8NGX8 325 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 CDCA5Q96FF9 252 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 FAM167AQ96KS9 214 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 KCNJ15Q99712 375 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 REEP2Q9BRK0 252 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 THUMPD3Q9BV44 507 aaKnown RBP6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 NRSN2Q9GZP1 204 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 PRDM14Q9GZV8 571 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 WNT8AQ9H1J5 351 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 PABPC3Q9H361 631 aaKnown RBP6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 MMADHCQ9H3L0 296 aaPredicted RBP6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 ABHD16BQ9H3Z7 469 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 NOD2Q9HC29 1040 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 PNPOQ9NVS9 261 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 GFOD1Q9NXC2 390 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 AKAP7Q9P0M2 348 aaPredicted RBP6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 PI4KBQ9UBF8 816 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 ANAPC5Q9UJX4 755 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 FAM169AQ9Y6X4 670 aa6.34□□□□□ -1.39
CBX1P3-201ENST00000413296 ERCC6L2Q5T890 1561 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 PRSS38A1L453 326 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 A8MXE2 369 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 H0Y8X5 98 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 SCDO00767 359 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 FCHO1O14526 889 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 AURKAO14965 403 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 KINO60870 393 aaKnown RBP6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 NOL3O60936 208 aaKnown RBP6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 MT-ND5P03915 603 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 AMY2AP04746 511 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 PRKCBP05771 671 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 CD3EP07766 207 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 CTSBP07858 339 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 PLS3P13797 630 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 PTPN2P17706 415 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 AMY2BP19961 511 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 EPHA1P21709 976 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 TMOD1P28289 359 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 HOXD10P28358 340 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 HOXA11P31270 313 aaPredicted RBP6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 ARL4DP49703 201 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 LGALS4P56470 323 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 AP2B1P63010 937 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 LSM11P83369 360 aaKnown RBP eCLIP6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 MECOMQ03112 1051 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 MALLQ13021 153 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 SMAD4Q13485 552 aaKnown RBP6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 NFE2L1Q14494 772 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 EPHA7Q15375 998 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 GPR19Q15760 415 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 ALG11Q2TAA5 492 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 CEP55Q53EZ4 464 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 ARL6IP4Q66PJ3 421 aaKnown RBP6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 MTFR2Q6P444 385 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 DENND5BQ6ZUT9 1274 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 H1FNTQ75WM6 255 aaPredicted RBP6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 METTL23Q86XA0 190 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 TMEM57Q8N5G2 664 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 SH2D3CQ8N5H7 860 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 C3orf20Q8ND61 904 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 RNF217Q8TC41 542 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 CSGALNACT1Q8TDX6 532 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 PPP1R13LQ8WUF5 828 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 ANKRD49Q8WVL7 239 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 SHC3Q92529 594 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 VPS33AQ96AX1 596 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 NMD3Q96D46 503 aaKnown RBP6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 LRRC46Q96FV0 321 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 CLMNQ96JQ2 1002 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 TSEN34Q9BSV6 310 aaKnown RBP6.33□□□□□ -1.4
CBX1P3-201ENST00000413296 NT5C3AQ9H0P0 336 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms