RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 FAM78AQ5JUQ0 283 aa15.96■□□□□ 0.15
CBX3-203ENST00000409747 METTL23Q86XA0 190 aa15.96■□□□□ 0.15
CBX3-203ENST00000409747 TMEM130Q8N3G9 435 aa15.96■□□□□ 0.15
CBX3-203ENST00000409747 DEPDC1BQ8WUY9 529 aa15.96■□□□□ 0.15
CBX3-203ENST00000409747 E2F7Q96AV8 911 aa15.96■□□□□ 0.15
CBX3-203ENST00000409747 CLIC6Q96NY7 704 aa15.96■□□□□ 0.15
CBX3-203ENST00000409747 ACCSQ96QU6 501 aa15.96■□□□□ 0.15
CBX3-203ENST00000409747 LTB4R2Q9NPC1 389 aa15.96■□□□□ 0.15
CBX3-203ENST00000409747 OLFML3Q9NRN5 406 aa15.96■□□□□ 0.15
CBX3-203ENST00000409747 ASB3Q9Y575 518 aa15.96■□□□□ 0.15
CBX3-203ENST00000409747 PCDHB13Q9Y5F0 798 aa15.96■□□□□ 0.15
CBX3-203ENST00000409747 MYMKA6NI61 221 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 TISP43B9A030 160 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 K7ELQ4 463 aaPredicted RBP15.95■□□□□ 0.14
CBX3-203ENST00000409747 GCNT3O95395 438 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 FGF19O95750 216 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 CYP11A1P05108 521 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 TAF6P49848 677 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 DUSP4Q13115 394 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 SLC39A14Q15043 492 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 L1TD1Q5T7N2 865 aaKnown RBP15.95■□□□□ 0.14
CBX3-203ENST00000409747 FAM173BQ6P4H8 233 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 ZNF852Q6ZMS4 543 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 TPRG1Q6ZUI0 275 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 HS6ST3Q8IZP7 471 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 IRF7Q92985 503 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 USP28Q96RU2 1077 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 TRMT61BQ9BVS5 477 aaKnown RBP15.95■□□□□ 0.14
CBX3-203ENST00000409747 STRA6Q9BX79 667 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 PLA2G2FQ9BZM2 168 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 SLITRK6Q9H5Y7 841 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 BRD9Q9H8M2 597 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 TRPV4Q9HBA0 871 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 DPP3Q9NY33 737 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 MTMR6Q9Y217 621 aa15.95■□□□□ 0.14
CBX3-203ENST00000409747 MTMR11A4FU01 709 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 FAM170BA6NMN3 283 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 STX6O43752 255 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 LDHAP00338 332 aaKnown RBP15.94■□□□□ 0.14
CBX3-203ENST00000409747 GLULP15104 373 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 SV2CQ496J9 727 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 CENPPQ6IPU0 288 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 ITIH5Q86UX2 942 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 THEM5Q8N1Q8 247 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 ZSCAN18Q8TBC5 510 aaPredicted RBP15.94■□□□□ 0.14
CBX3-203ENST00000409747 DNAJC19Q96DA6 116 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 ZNF560Q96MR9 790 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 BACH2Q9BYV9 841 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 MAN2B1O00754 1011 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 SPTLC1O15269 473 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 MOSPD3O75425 235 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 VNN2O95498 520 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 IDEP14735 1019 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 PSMC3P17980 439 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 PNPLA4P41247 253 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 SMARCB1Q12824 385 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 GRM2Q14416 872 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 SYCP3Q8IZU3 236 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 PYM1Q9BRP8 204 aaKnown RBP15.94■□□□□ 0.14
CBX3-203ENST00000409747 LRRC27Q9C0I9 530 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 TRPV5Q9NQA5 729 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 HEBP1Q9NRV9 189 aa15.94■□□□□ 0.14
CBX3-203ENST00000409747 SPATA6Q9NWH7 488 aaPredicted RBP15.94■□□□□ 0.14
CBX3-203ENST00000409747 PATJQ8NI35 1801 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 CYB561D2O14569 222 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 LAMTOR5O43504 91 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 LRRN2O75325 713 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 SP9P0CG40 484 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 GARTP22102 1010 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 ADSSP30520 456 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 NASPP49321 788 aaPredicted RBP15.93■□□□□ 0.14
CBX3-203ENST00000409747 TUFMP49411 452 aaKnown RBP15.93■□□□□ 0.14
CBX3-203ENST00000409747 VEPH1Q14D04 833 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 STK38Q15208 465 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 TEAD2Q15562 447 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 POTEHQ6S545 545 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 CRELD2Q6UXH1 353 aaPredicted RBP15.93■□□□□ 0.14
CBX3-203ENST00000409747 STXBP4Q6ZWJ1 553 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 CCDC65Q8IXS2 484 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 SHKBP1Q8TBC3 707 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 C2orf15Q8WU43 125 aaKnown RBP15.93■□□□□ 0.14
CBX3-203ENST00000409747 PSMG2Q969U7 264 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 BORCS6Q96GS4 357 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 DNAJC25Q9H1X3 360 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 CRISPLD1Q9H336 500 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 TMEM206Q9H813 350 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 TBC1D7Q9P0N9 293 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 FBXO4Q9UKT5 387 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 TCHHQ07283 1943 aa15.93■□□□□ 0.14
CBX3-203ENST00000409747 FRMD3A2A2Y4 597 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 LMNAP02545 664 aaKnown RBP15.92■□□□□ 0.14
CBX3-203ENST00000409747 RPS9P46781 194 aaKnown RBP15.92■□□□□ 0.14
CBX3-203ENST00000409747 ZNF528Q3MIS6 628 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 VITQ6UXI7 678 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 TMC8Q8IU68 726 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 BRSK2Q8IWQ3 736 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 EFCAB13Q8IY85 973 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 ADSSL1Q8N142 457 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 ATAD1Q8NBU5 361 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 OR10T2Q8NGX3 314 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms