RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 FAM90A1Q86YD7 464 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 PDSS2Q86YH6 399 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 RAVER1Q8IY67 606 aaKnown RBP5.28□□□□□ -1.56
PMS1-203ENST00000409593 Q8NA96 180 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 LINC00476Q8WZB0 136 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 SCAMP4Q969E2 229 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 SLC35A4Q96G79 324 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 CDH19Q9H159 772 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 NMRK2Q9NPI5 230 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 RLIMQ9NVW2 624 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 VSX1Q9NZR4 365 aaPredicted RBP5.28□□□□□ -1.56
PMS1-203ENST00000409593 CTTNBP2NLQ9P2B4 639 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 C11orf21Q9P2W6 132 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 EPN1Q9Y6I3 576 aaPredicted RBP5.28□□□□□ -1.56
PMS1-203ENST00000409593 A0A1W2PS29 197 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 MATN4O95460 622 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 AHSGP02765 367 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 GNAI2P04899 355 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 ALDH2P05091 517 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 RARBP10826 455 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 HSPA6P17066 643 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 PLA2G5P39877 138 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 RPS7P62081 194 aaKnown RBP5.28□□□□□ -1.56
PMS1-203ENST00000409593 FOXI1Q12951 378 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 PCSK9Q8NBP7 692 aaKnown RBP5.28□□□□□ -1.56
PMS1-203ENST00000409593 BRIX1Q8TDN6 353 aaKnown RBP5.28□□□□□ -1.56
PMS1-203ENST00000409593 SNX19Q92543 992 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 FAM167AQ96KS9 214 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 AIFM2Q9BRQ8 373 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 MRPL46Q9H2W6 279 aaKnown RBP5.28□□□□□ -1.56
PMS1-203ENST00000409593 SLC12A5Q9H2X9 1139 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 ARMT1Q9H993 441 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 DMTF1Q9Y222 760 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 STXBP5LQ9Y2K9 1186 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 THRAP3Q9Y2W1 955 aaKnown RBP5.28□□□□□ -1.56
PMS1-203ENST00000409593 NEU2Q9Y3R4 380 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 VPS4BO75351 444 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 SUN1O94901 812 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 ANXA11P50995 505 aaKnown RBP5.27□□□□□ -1.57
PMS1-203ENST00000409593 INHBEP58166 350 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 PLS1Q14651 629 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 KIF22Q14807 665 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 SF3B3Q15393 1217 aaKnown RBP5.27□□□□□ -1.57
PMS1-203ENST00000409593 Q6ZNX1 250 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 PPP1R3BQ86XI6 285 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 ADGRG5Q8IZF4 528 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 DIS3LQ8TF46 1054 aaKnown RBP5.27□□□□□ -1.57
PMS1-203ENST00000409593 FBXO41Q8TF61 875 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 FUBP1Q96AE4 644 aaKnown RBP5.27□□□□□ -1.57
PMS1-203ENST00000409593 MTFMTQ96DP5 389 aaKnown RBP5.27□□□□□ -1.57
PMS1-203ENST00000409593 C1GALT1C1Q96EU7 318 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 CDK5RAP3Q96JB5 506 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 CGRRF1Q99675 332 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 CNPPD1Q9BV87 410 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 INTS13Q9NVM9 706 aa5.27□□□□□ -1.57
PMS1-203ENST00000409593 NOB1Q9ULX3 412 aaKnown RBP5.27□□□□□ -1.57
PMS1-203ENST00000409593 M0QYG6 137 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 ESRRBO95718 433 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 CHRM3P20309 590 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 BMP5P22003 454 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 POU6F2P78424 691 aaPredicted RBP5.26□□□□□ -1.57
PMS1-203ENST00000409593 PURAQ00577 322 aaKnown RBP5.26□□□□□ -1.57
PMS1-203ENST00000409593 COL10A1Q03692 680 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 EXOSC9Q06265 439 aaKnown RBP5.26□□□□□ -1.57
PMS1-203ENST00000409593 SP5Q6BEB4 398 aaPredicted RBP5.26□□□□□ -1.57
PMS1-203ENST00000409593 ANKRD13AQ8IZ07 590 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 JDP2Q8WYK2 163 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 ZG16BQ96DA0 208 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 AIFM3Q96NN9 605 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 TINAGL1Q9GZM7 467 aaPredicted RBP5.26□□□□□ -1.57
PMS1-203ENST00000409593 GPR35Q9HC97 309 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.26□□□□□ -1.57
PMS1-203ENST00000409593 MRPS18AQ9NVS2 196 aaKnown RBP5.26□□□□□ -1.57
PMS1-203ENST00000409593 KCTD5Q9NXV2 234 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 LRIT1Q9P2V4 623 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 ZDHHC8Q9ULC8 765 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 AGAP1Q9UPQ3 857 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 MAST3O60307 1309 aa5.26□□□□□ -1.57
PMS1-203ENST00000409593 PRSS29PA6NIE9 313 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 KIF20AO95235 890 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 CHEK2O96017 543 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 MYBP10242 640 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 CXCR5P32302 372 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 KCNJ5P48544 419 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 NKX6-1P78426 367 aaPredicted RBP5.25□□□□□ -1.57
PMS1-203ENST00000409593 DYRK1AQ13627 763 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 SMN1Q16637 294 aaKnown RBP5.25□□□□□ -1.57
PMS1-203ENST00000409593 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 DENND1CQ8IV53 801 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 SLC30A5Q8TAD4 765 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 KLHDC4Q8TBB5 520 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 LRIG1Q96JA1 1093 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 SIK2Q9H0K1 926 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 SARS2Q9NP81 518 aaKnown RBP5.25□□□□□ -1.57
PMS1-203ENST00000409593 ZNHIT2Q9UHR6 403 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 CPA4Q9UI42 421 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 PCDHA6Q9UN73 950 aa5.25□□□□□ -1.57
PMS1-203ENST00000409593 PEX1O43933 1283 aa5.24□□□□□ -1.57
PMS1-203ENST00000409593 RFPL1O75677 317 aa5.24□□□□□ -1.57
PMS1-203ENST00000409593 SCGB1D2O95969 90 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms