RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 OR10H5Q8NGA6 315 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZFP28Q8NHY6 868 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 CYP2W1Q8TAV3 490 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZSCAN18Q8TBC5 510 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 SMCR8Q8TEV9 937 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 MUL1Q969V5 352 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 GCC1Q96CN9 775 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 GPHA2Q96T91 129 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 NDC1Q9BTX1 674 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 MAGEB5Q9BZ81 275 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 KCNH6Q9H252 994 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 NELFAQ9H3P2 528 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 SMURF2Q9HAU4 748 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 KCNK12Q9HB15 430 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 GPR35Q9HC97 309 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 USP40Q9NVE5 1235 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZNF212Q9UDV6 495 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 SLC23A1Q9UHI7 598 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 TMX2Q9Y320 296 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZMYM3Q14202 1370 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 A0A087WWL8 130 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 TCRBV7S2A1N4TA0A589 114 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 UBE2QL1A1L167 161 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 MROH6A6NGR9 719 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 PYCARD-AS1I3L0S3 204 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 UNC5CO95185 931 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 GRPP07492 148 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 CYP2C9P11712 490 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 MGAT1P26572 445 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 PPFIA1Q13136 1202 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 RIN1Q13671 783 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 SSPNQ14714 243 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 TBR1Q16650 682 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 TUBB8Q3ZCM7 444 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 KLHDC7AQ5VTJ3 777 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 USP17L6PQ6QN14 398 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 ADGRE4PQ86SQ3 457 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 MPP5Q8N3R9 675 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 FITM2Q8N6M3 262 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 TEX19Q8NA77 164 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 PCSK9Q8NBP7 692 aaKnown RBP5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 MAML1Q92585 1016 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 FAM84AQ96KN4 292 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 RMDN3Q96TC7 470 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 NECTIN3Q9NQS3 549 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZSCAN32Q9NX65 697 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 PGAP2Q9UHJ9 254 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 ITGB1BP2Q9UKP3 347 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 SLC39A10Q9ULF5 831 aa5.63□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZNF785A8K8V0 405 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 PRR5-ARHGAP8B1AHC4 643 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 HOXA3O43365 443 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 SBK3P0C264 359 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 TXNP10599 105 aaKnown RBP5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 AFF3P51826 1226 aaKnown RBP5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 WNT3P56703 355 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 RAP2BP61225 183 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 PSMC1P62191 440 aaKnown RBP5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 FOXO1Q12778 655 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 CTBP1Q13363 440 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 RNF151Q2KHN1 245 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 FKBP15Q5T1M5 1219 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZFYVE27Q5T4F4 411 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 ARL6IP4Q66PJ3 421 aaKnown RBP5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 ATG14Q6ZNE5 492 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 FRMD5Q7Z6J6 570 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 FAM83AQ86UY5 434 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZNF761Q86XN6 746 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 KRT73Q86Y46 540 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 DNAJC5GQ8N7S2 189 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 SPSB4Q96A44 273 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 MBD6Q96DN6 1003 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 TBATAQ96M53 351 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 CNPPD1Q9BV87 410 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 TINAGL1Q9GZM7 467 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 REXO4Q9GZR2 422 aaKnown RBP5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 C12orf65Q9H3J6 166 aaKnown RBP5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 BICRAQ9NZM4 1560 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 SMARCA4P51532 1647 aa5.62□□□□□ -1.51
HMGB3P18-201ENST00000406327 CCDC88BA6NC98 1476 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 TBKBP1A7MCY6 615 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 SYT5O00445 386 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 PODXLO00592 558 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 IRAK2O43187 625 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 RASSF9O75901 435 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 PIM1P11309 404 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 GNAT2P19087 354 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 IL1R2P27930 398 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 PHKA1P46020 1223 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 SLC11A2P49281 568 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZNF135P52742 658 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 PRKG1Q13976 671 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 SURF1Q15526 300 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 BMT2Q1RMZ1 405 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 ATXN7L2Q5T6C5 722 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 FAM160B1Q5W0V3 765 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 MMS22LQ6ZRQ5 1243 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 UNC13DQ70J99 1090 aa5.61□□□□□ -1.51
HMGB3P18-201ENST00000406327 UBE3BQ7Z3V4 1068 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms