RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PIP5K1CO60331 668 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 ZSCAN22P10073 491 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 ALAS1P13196 640 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 IL1R1P14778 569 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 SLC11A2P49281 568 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 BOP1Q14137 746 aaKnown RBP4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 HABP2Q14520 560 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 SLC35G1Q2M3R5 365 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 C1QL3Q5VWW1 255 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 ZDHHC24Q6UX98 284 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 Q6ZRM9 215 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 UNC13DQ70J99 1090 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 DOK3Q7L591 496 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 APBB1IPQ7Z5R6 666 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 ZFPM1Q8IX07 1006 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 NLGN4YQ8NFZ3 816 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 OR52N2Q8NGI0 321 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 ZFP28Q8NHY6 868 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 TRIM43Q96BQ3 446 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 MARS2Q96GW9 593 aaKnown RBP4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 TOX2Q96NM4 488 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 ZSWIM1Q9BR11 485 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 TEX101Q9BY14 249 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 DPH1Q9BZG8 443 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 TRMT13Q9NUP7 481 aaKnown RBP4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 ITGB1BP2Q9UKP3 347 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 CAPN14A8MX76 684 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 PYCARD-AS1I3L0S3 204 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 CREB3O43889 395 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 RAD17O75943 681 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 APOBEC3AP31941 199 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 CHKAP35790 457 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 RPS19P39019 145 aaKnown RBP4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 LONRF3Q496Y0 759 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 TSHZ3Q63HK5 1081 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 LMBRD2Q68DH5 695 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 TXLNBQ8N3L3 684 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 ZNF808Q8N4W9 903 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 ATP11CQ8NB49 1132 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 MDGA1Q8NFP4 955 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 NMD3Q96D46 503 aaKnown RBP4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 LRRC46Q96FV0 321 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 SUCLG2Q96I99 432 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 SNX22Q96L94 193 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 KCNC2Q96PR1 638 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 BRIP1Q9BX63 1249 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 TTYH3Q9C0H2 523 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 GPR35Q9HC97 309 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 ARFGAP3Q9NP61 516 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 LRCH1Q9Y2L9 728 aa4.72□□□□□ -1.65
HMGB1P17-201ENST00000403495 A0A087WV62 115 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 A0A087WWL8 130 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 A0A1W2PPC4 97 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZNF185O15231 689 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 MFAP3LO75121 409 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 FGF18O76093 207 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 MT-ND5P03915 603 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 INHBBP09529 407 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 PIM1P11309 404 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 FGFR2P21802 821 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 HALP42357 657 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 HSPA7P48741 367 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 CARSP49589 748 aaKnown RBP4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 RNASE9P60153 205 aaKnown RBP4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 NHLH2Q02577 135 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 ELF2Q15723 593 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 MPEG1Q2M385 716 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 ARL13BQ3SXY8 428 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 INO80DQ53TQ3 878 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 UBXN11Q5T124 520 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 METRNLQ641Q3 311 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 MFSD5Q6N075 450 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 SGMS1Q86VZ5 419 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 PDSS2Q86YH6 399 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 MYLK4Q86YV6 388 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 AOPEPQ8N6M6 819 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 SCAMP4Q969E2 229 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 LRIG1Q96JA1 1093 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 MSLNLQ96KJ4 702 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZNF518BQ9C0D4 1074 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 MS4A7Q9GZW8 240 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 XYLT2Q9H1B5 865 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 CHST8Q9H2A9 424 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 SMOC2Q9H3U7 446 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZCCHC4Q9H5U6 513 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 RLIMQ9NVW2 624 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 HSFX1Q9UBD0 423 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 XPR1Q9UBH6 696 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 MID2Q9UJV3 735 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 HDAC9Q9UKV0 1011 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 TMX2Q9Y320 296 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 USP15Q9Y4E8 981 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 PLEKHM1Q9Y4G2 1056 aa4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 MORC2Q9Y6X9 1032 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P17-201ENST00000403495 KLRG2A4D1S0 409 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 FOXN3O00409 490 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 DCLK1O15075 740 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 RASSF9O75901 435 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 IPO13O94829 963 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms