RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SPATA31D3P0C874 917 aa27.44■■□□□ 1.98
U2AF1-203ENST00000398137 ERCC5P28715 1186 aaPredicted RBP27.44■■□□□ 1.98
U2AF1-203ENST00000398137 CLCNKBP51801 687 aa27.44■■□□□ 1.98
U2AF1-203ENST00000398137 SIGLEC14Q08ET2 396 aa27.44■■□□□ 1.98
U2AF1-203ENST00000398137 SPATA1Q5VX52 437 aa27.44■■□□□ 1.98
U2AF1-203ENST00000398137 SPATA31D4Q6ZUB0 917 aa27.44■■□□□ 1.98
U2AF1-203ENST00000398137 CMASQ8NFW8 434 aaPredicted RBP27.44■■□□□ 1.98
U2AF1-203ENST00000398137 CEP63Q96MT8 703 aa27.44■■□□□ 1.98
U2AF1-203ENST00000398137 UROC1Q96N76 676 aa27.44■■□□□ 1.98
U2AF1-203ENST00000398137 MTMR12Q9C0I1 747 aa27.44■■□□□ 1.98
U2AF1-203ENST00000398137 DNAJC25Q9H1X3 360 aa27.44■■□□□ 1.98
U2AF1-203ENST00000398137 KMT2EQ8IZD2 1858 aa27.44■■□□□ 1.98
U2AF1-203ENST00000398137 SF3B1O75533 1304 aaKnown RBP eCLIP27.43■■□□□ 1.986e-6■■■■■ 103.4
U2AF1-203ENST00000398137 PODXLO00592 558 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 TGM5O43548 720 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 RFPL2O75678 378 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 GLUD1P00367 558 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 TMEM191BP0C7N4 346 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 CYP3A5P20815 502 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 C15orf39Q6ZRI6 1047 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 PALB2Q86YC2 1186 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 NT5DC4Q86YG4 428 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 WDR49Q8IV35 697 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 GLYCTKQ8IVS8 523 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 ZDHHC14Q8IZN3 488 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 OR5B17Q8NGF7 314 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 ZNF707Q96C28 371 aaPredicted RBP27.43■■□□□ 1.98
U2AF1-203ENST00000398137 FAM122AQ96E09 287 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 INTS13Q9NVM9 706 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 USTQ9Y2C2 406 aa27.43■■□□□ 1.98
U2AF1-203ENST00000398137 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.43■■□□□ 1.98
U2AF1-203ENST00000398137 LRRIQ3A6PVS8 624 aaPredicted RBP27.42■■□□□ 1.98
U2AF1-203ENST00000398137 ASGR2P07307 311 aa27.42■■□□□ 1.98
U2AF1-203ENST00000398137 CCDC192P0DO97 292 aa27.42■■□□□ 1.98
U2AF1-203ENST00000398137 KRT13P13646 458 aa27.42■■□□□ 1.98
U2AF1-203ENST00000398137 TNNI1P19237 187 aa27.42■■□□□ 1.98
U2AF1-203ENST00000398137 DLG4P78352 724 aa27.42■■□□□ 1.98
U2AF1-203ENST00000398137 UPP1Q16831 310 aa27.42■■□□□ 1.98
U2AF1-203ENST00000398137 INTS8Q75QN2 995 aaKnown RBP27.42■■□□□ 1.98
U2AF1-203ENST00000398137 KREMEN2Q8NCW0 462 aa27.42■■□□□ 1.98
U2AF1-203ENST00000398137 LNX1Q8TBB1 728 aaPredicted RBP27.42■■□□□ 1.98
U2AF1-203ENST00000398137 TMC2Q8TDI7 906 aa27.42■■□□□ 1.98
U2AF1-203ENST00000398137 PARD3BQ8TEW8 1205 aa27.42■■□□□ 1.98
U2AF1-203ENST00000398137 CACTINQ8WUQ7 758 aaKnown RBP27.42■■□□□ 1.98
U2AF1-203ENST00000398137 DDX27Q96GQ7 796 aaKnown RBP27.42■■□□□ 1.98
U2AF1-203ENST00000398137 SRRTQ9BXP5 876 aaKnown RBP27.42■■□□□ 1.98
U2AF1-203ENST00000398137 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.42■■□□□ 1.98
U2AF1-203ENST00000398137 DPP3Q9NY33 737 aa27.42■■□□□ 1.98
U2AF1-203ENST00000398137 MUC6Q6W4X9 2439 aa27.42■■□□□ 1.98
U2AF1-203ENST00000398137 CCDC195A0A1B0GUA6 201 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 N4BP1O75113 896 aaKnown RBP27.41■■□□□ 1.98
U2AF1-203ENST00000398137 TRIM49P0CI25 452 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 TRIM49CP0CI26 452 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 LRPAP1P30533 357 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 VAMP7P51809 220 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 BFSP1Q12934 665 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 CCDC40Q4G0X9 1142 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 CT47A1Q5JQC4 288 aaPredicted RBP27.41■■□□□ 1.98
U2AF1-203ENST00000398137 FAM171A1Q5VUB5 890 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 TDRD5Q8NAT2 981 aaKnown RBP27.41■■□□□ 1.98
U2AF1-203ENST00000398137 C3orf58Q8NDZ4 430 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 PIK3R5Q8WYR1 880 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 BORCS6Q96GS4 357 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 ANKRD36BP1Q96IX9 119 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 CLSTN3Q9BQT9 956 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 FUCA2Q9BTY2 467 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 LIMD1Q9UGP4 676 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 DOCK6Q96HP0 2047 aa27.41■■□□□ 1.98
U2AF1-203ENST00000398137 TMEM189-UBE2V1I3L0A0 370 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 PPEF2O14830 753 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 ADAM12O43184 909 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 C1RP00736 705 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 TNNC2P02585 160 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 RPL9P32969 192 aaKnown RBP27.4■■□□□ 1.98
U2AF1-203ENST00000398137 TPD52L1Q16890 204 aaPredicted RBP27.4■■□□□ 1.98
U2AF1-203ENST00000398137 ANO6Q4KMQ2 910 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 FILIP1Q7Z7B0 1213 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 C1orf127Q8N9H9 656 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 PBXIP1Q96AQ6 731 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 TTPALQ9BTX7 342 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 RHOBTB2Q9BYZ6 727 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 DOCK8Q8NF50 2099 aa27.4■■□□□ 1.98
U2AF1-203ENST00000398137 B3GAT3O94766 335 aa27.39■■□□□ 1.98
U2AF1-203ENST00000398137 DUOXA2Q1HG44 320 aa27.39■■□□□ 1.98
U2AF1-203ENST00000398137 C1orf220Q5T0J3 134 aa27.39■■□□□ 1.98
U2AF1-203ENST00000398137 C9orf57Q5W0N0 161 aa27.39■■□□□ 1.98
U2AF1-203ENST00000398137 DCLRE1AQ6PJP8 1040 aa27.39■■□□□ 1.98
U2AF1-203ENST00000398137 HDAC7Q8WUI4 952 aa27.39■■□□□ 1.98
U2AF1-203ENST00000398137 ZNF516Q92618 1163 aa27.39■■□□□ 1.98
U2AF1-203ENST00000398137 ARMCX3Q9UH62 379 aaPredicted RBP27.39■■□□□ 1.98
U2AF1-203ENST00000398137 SORCS3Q9UPU3 1222 aa27.39■■□□□ 1.98
U2AF1-203ENST00000398137 SPDYE4A6NLX3 237 aa27.38■■□□□ 1.97
U2AF1-203ENST00000398137 FGFR1OPO95684 399 aaKnown RBP27.38■■□□□ 1.97
U2AF1-203ENST00000398137 PDGFBP01127 241 aaPredicted RBP27.38■■□□□ 1.97
U2AF1-203ENST00000398137 ITGB3P05106 788 aa27.38■■□□□ 1.97
U2AF1-203ENST00000398137 POLR2BP30876 1174 aaKnown RBP27.38■■□□□ 1.97
U2AF1-203ENST00000398137 DCAF17Q5H9S7 520 aaPredicted RBP27.38■■□□□ 1.97
U2AF1-203ENST00000398137 CCDC149Q6ZUS6 474 aa27.38■■□□□ 1.97
U2AF1-203ENST00000398137 USP37Q86T82 979 aa27.38■■□□□ 1.97
U2AF1-203ENST00000398137 ITGA11Q9UKX5 1188 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms