RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 ZNF623O75123 536 aa15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 ENDOD1O94919 500 aa15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 FTCDO95954 541 aa15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 PAFAH1B1P43034 410 aa15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 CUL1Q13616 776 aa15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 LCLAT1Q6UWP7 414 aa15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 CRYBG2Q8N1P7 616 aa15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 ACAP3Q96P50 834 aa15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 PPP1R10Q96QC0 940 aaKnown RBP15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 ARFGAP3Q9NP61 516 aa15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 WDR35Q9P2L0 1181 aa15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 NOC2LQ9Y3T9 749 aaKnown RBP15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 SCN1AP35498 2009 aa15.12■□□□□ 0.01
CDC42SE2-202ENST00000395246 FAM187AA6NFU0 413 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 ERLIN1O75477 346 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 RBP5P82980 135 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 CAP1Q01518 475 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 NOGQ13253 232 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 SPOPLQ6IQ16 392 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 TRAF7Q6Q0C0 670 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 SMG8Q8ND04 991 aaKnown RBP15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 NUP85Q9BW27 656 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 MED7O43513 233 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 FNTAP49354 379 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 PRMT2P55345 433 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 ZNF252P-AS1Q0IIN9 211 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 NLRP4Q96MN2 994 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 LRRC1Q9BTT6 524 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 PARVAQ9NVD7 372 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 STRIP2Q9ULQ0 834 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 BARX2Q9UMQ3 279 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 CABYRO75952 493 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 VTNP04004 478 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 VDRP11473 427 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 ZNF268Q14587 947 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 TMEM132DQ14C87 1099 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 TMCO3Q6UWJ1 677 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 SYDE1Q6ZW31 735 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 DAAM2Q86T65 1068 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 CREBZFQ9NS37 354 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 SETD4Q9NVD3 440 aa15.11■□□□□ 0.01
CDC42SE2-202ENST00000395246 PFKMP08237 780 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 GBP1P32455 592 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 ZNF699Q32M78 642 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 ZDHHC14Q8IZN3 488 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 SCML4Q8N228 414 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 CEP120Q8N960 986 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 TMEM40Q8WWA1 233 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 FRMD8P1Q9BZ68 369 aaPredicted RBP15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 IMPG2Q9BZV3 1241 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 SIGLEC16A6NMB1 481 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 PNPLA4P41247 253 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 MAP9Q49MG5 647 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 HDXQ7Z353 690 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 RELL1Q8IUW5 271 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 CDHR5Q9HBB8 845 aa15.1■□□□□ 0.01
CDC42SE2-202ENST00000395246 C3orf70A6NLC5 250 aaPredicted RBP15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 INO80B-WBP1J3KQ70 363 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 CFHP08603 1231 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 GPD2P43304 727 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 TNNC1P63316 161 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 TEX35Q5T0J7 233 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 TFAP2BQ92481 460 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 CYFIP2Q96F07 1278 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 ZHX1Q9UKY1 873 aaPredicted RBP15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 NME7Q9Y5B8 376 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 GRIN2DO15399 1336 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 GABRDO14764 452 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 P4HA1P13674 534 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 COMTP21964 271 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 ARSEP51690 589 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 EPHB4P54760 987 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 C2orf54Q08AI8 447 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 DUPD1Q68J44 220 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 UBL4BQ8N7F7 174 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 ZMAT2Q96NC0 199 aaKnown RBP15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 CELF4Q9BZC1 486 aaKnown RBP15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 PHACTR1Q9C0D0 580 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 AKT3Q9Y243 479 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 WARSP23381 471 aaKnown RBP15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 MRPS6P82932 125 aaKnown RBP15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 ZDHHC17Q8IUH5 632 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 EXD1Q8NHP7 514 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 ZBTB10Q96DT7 871 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 TMEM176AQ96HP8 235 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 MS4A14Q96JA4 679 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 SLC4A5Q9BY07 1137 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 ERVK-5Q9HDB9 667 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 ACP6Q9NPH0 428 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 DPP3Q9NY33 737 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 CNOT8Q9UFF9 292 aaKnown RBP15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 PCDHB4Q9Y5E5 795 aa15.09■□□□□ 0.01
CDC42SE2-202ENST00000395246 O00370 1275 aa15.08■□□□□ 0.01
CDC42SE2-202ENST00000395246 DYNC1LI2O43237 492 aaPredicted RBP15.08■□□□□ 0.01
CDC42SE2-202ENST00000395246 PHF2O75151 1096 aa15.08■□□□□ 0.01
CDC42SE2-202ENST00000395246 CD4P01730 458 aa15.08■□□□□ 0.01
CDC42SE2-202ENST00000395246 CHRNA3P32297 505 aa15.08■□□□□ 0.01
CDC42SE2-202ENST00000395246 HSPA9P38646 679 aaKnown RBP15.08■□□□□ 0.01
CDC42SE2-202ENST00000395246 MFSD14CQ5VZR4 134 aa15.08■□□□□ 0.01
CDC42SE2-202ENST00000395246 FEZF2Q8TBJ5 459 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms