RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 SCAPQ12770 1279 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 FSTL1Q12841 308 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 PLS1Q14651 629 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 PPP2R5AQ15172 486 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 CAVIN3Q969G5 261 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 MTFMTQ96DP5 389 aaKnown RBP7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 PTCD3Q96EY7 689 aaKnown RBP7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 SMOQ99835 787 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 TOR3AQ9H497 397 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 SYBUQ9NX95 663 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 PCDHA1Q9Y5I3 950 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 ZNF785A8K8V0 405 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 H3BML4 177 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 MATN4O95460 622 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 FDXRP22570 491 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 RPS7P62081 194 aaKnown RBP7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 HABP2Q14520 560 aaPredicted RBP7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 GEN1Q17RS7 908 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 HECTD2Q5U5R9 776 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 B3GNT9Q6UX72 402 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 EPM2AIP1Q7L775 607 aaPredicted RBP7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 DENND1CQ8IV53 801 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 KLHDC4Q8TBB5 520 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 BRIX1Q8TDN6 353 aaKnown RBP7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 LINC00476Q8WZB0 136 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 DDX17Q92841 729 aaKnown RBP7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 SLC35A4Q96G79 324 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 CTTNBP2NLQ9P2B4 639 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 DMTF1Q9Y222 760 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 DMRT1Q9Y5R6 373 aa7.46□□□□□ -1.22
SNORA40.4-201ENST00000390971 TRGV11A0A075B6L2 103 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 E7ENX8 843 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 E9PLN8 166 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 POLRMTO00411 1230 aaKnown RBP7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 GNAI2P04899 355 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 PHKA1P46020 1223 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 ANXA11P50995 505 aaKnown RBP7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 TAP2Q03519 686 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 DYRK1AQ13627 763 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 FAM102BQ5T8I3 360 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 PPP1R3BQ86XI6 285 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 BEND2Q8NDZ0 799 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 Q96MF0 132 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 TRIB1Q96RU8 372 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 VKORC1Q9BQB6 163 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 SARS2Q9NP81 518 aaKnown RBP7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 CASS4Q9NQ75 786 aa7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 VSX1Q9NZR4 365 aaPredicted RBP7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 NOB1Q9ULX3 412 aaKnown RBP7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 G3BP2Q9UN86 482 aaKnown RBP7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 EPN1Q9Y6I3 576 aaPredicted RBP7.45□□□□□ -1.22
SNORA40.4-201ENST00000390971 PPM1GO15355 546 aaPredicted RBP7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 ZFPL1O95159 310 aa7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 ZNF135P52742 658 aaPredicted RBP7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 TAPT1Q6NXT6 567 aa7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 NSUN7Q8NE18 718 aaKnown RBP7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 TAAR9Q96RI9 348 aa7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 CNPPD1Q9BV87 410 aa7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 ANLNQ9NQW6 1124 aa7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 INTS13Q9NVM9 706 aa7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 MAST3O60307 1309 aa7.44□□□□□ -1.22
SNORA40.4-201ENST00000390971 A0A088AWK7 358 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 TOR1BO14657 336 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 CTNND1O60716 968 aaKnown RBP7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 SUN1O94901 812 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 ESRRBO95718 433 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 SCGB1D2O95969 90 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 AHSGP02765 367 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 SEC24CP53992 1094 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 MPP3Q13368 585 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 FGL2Q14314 439 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 LRRC41Q15345 812 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 MINDY4Q4G0A6 757 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 EMC10Q5UCC4 262 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 NXNQ6DKJ4 435 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 USP37Q86T82 979 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 TCEAL8Q8IYN2 117 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 LNX2Q8N448 690 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 POC1BQ8TC44 478 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 SLC9A6Q92581 669 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 TMEM125Q96AQ2 219 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 ACO2Q99798 780 aaKnown RBP7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 RSAD1Q9HA92 442 aa7.43□□□□□ -1.22
SNORA40.4-201ENST00000390971 UBXN7O94888 489 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 HTR1BP28222 390 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 MPLP40238 635 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 TCF15Q12870 199 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 HLXQ14774 488 aaPredicted RBP7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 PREPLQ4J6C6 727 aaPredicted RBP7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 KHDC1LQ5JSQ8 128 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 PCSK4Q6UW60 755 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 MICALCLQ6ZW33 695 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 DAAM2Q86T65 1068 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 SNX19Q92543 992 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 LRIG1Q96JA1 1093 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 AIFM2Q9BRQ8 373 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 ARMT1Q9H993 441 aa7.42□□□□□ -1.22
SNORA40.4-201ENST00000390971 CNNM1Q9NRU3 951 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms