RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 BRDTQ58F21 947 aaPredicted RBP9.49□□□□□ -0.89
GPNMB-202ENST00000381990 VSTM1Q6UX27 236 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 EEPD1Q7L9B9 569 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 KCNN1Q92952 543 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 TGS1Q96RS0 853 aaKnown RBP9.49□□□□□ -0.89
GPNMB-202ENST00000381990 PCYT2Q99447 389 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 AGPAT1Q99943 283 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 CDC42EP4Q9H3Q1 356 aaKnown RBP9.49□□□□□ -0.89
GPNMB-202ENST00000381990 NRBP2Q9NSY0 501 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 CTTNBP2NLQ9P2B4 639 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 CTNNAL1Q9UBT7 734 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 RPL26L1Q9UNX3 145 aaKnown RBP9.49□□□□□ -0.89
GPNMB-202ENST00000381990 EMSYQ7Z589 1322 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 A6NHS1 94 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 PMM2O15305 246 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 RFC5P40937 340 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 STAT5BP51692 787 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 DLG4P78352 724 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 SARNPP82979 210 aaKnown RBP9.48□□□□□ -0.89
GPNMB-202ENST00000381990 SNRNP35Q16560 246 aaKnown RBP9.48□□□□□ -0.89
GPNMB-202ENST00000381990 SPDYAQ5MJ70 313 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 WDR78Q5VTH9 848 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 MAP1SQ66K74 1059 aaPredicted RBP9.48□□□□□ -0.89
GPNMB-202ENST00000381990 SLC13A5Q86YT5 568 aaPredicted RBP9.48□□□□□ -0.89
GPNMB-202ENST00000381990 AGGF1Q8N302 714 aaeCLIP9.48□□□□□ -0.89
GPNMB-202ENST00000381990 SH3TC2Q8TF17 1288 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 SLC7A3Q8WY07 619 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 NAF1Q96HR8 494 aaKnown RBP9.48□□□□□ -0.89
GPNMB-202ENST00000381990 TMEM237Q96Q45 408 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 PORCNQ9H237 461 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 LRMDAQ9H2I8 198 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 NKIRAS1Q9NYS0 192 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 LGALS13Q9UHV8 139 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 STK38LQ9Y2H1 464 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 LRRC42Q9Y546 428 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 MCM3APO60318 1980 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 TTC4O95801 387 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 ADRB2P07550 413 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 CETPP11597 493 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 GARTP22102 1010 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 STX2P32856 288 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 TCF7P36402 384 aaPredicted RBP9.48□□□□□ -0.89
GPNMB-202ENST00000381990 PPP3CAQ08209 521 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 SETDB1Q15047 1291 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 LRRC14Q15048 493 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 TARBP2Q15633 366 aaKnown RBP9.48□□□□□ -0.89
GPNMB-202ENST00000381990 LONRF1Q17RB8 773 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 LY6KQ17RY6 165 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 C1orf220Q5T0J3 134 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 SLC39A4Q6P5W5 647 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 ZSWIM2Q8NEG5 633 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 LMO3Q8TAP4 145 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 PLEKHO2Q8TD55 490 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 PRCCQ92733 491 aaPredicted RBP9.48□□□□□ -0.89
GPNMB-202ENST00000381990 KRT35Q92764 455 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 INPP5DQ92835 1189 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 CD101Q93033 1021 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 FAM167AQ96KS9 214 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 FBXL18Q96ME1 805 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 ZNF408Q9H9D4 720 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 SEPT11Q9NVA2 429 aaKnown RBP9.48□□□□□ -0.89
GPNMB-202ENST00000381990 SLC45A1Q9Y2W3 748 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 PPME1Q9Y570 386 aa9.48□□□□□ -0.89
GPNMB-202ENST00000381990 GOLGA8IPA6NC78 632 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 GOLGA8JA6NMD2 632 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 HNRNPDLO14979 420 aaKnown RBP9.47□□□□□ -0.89
GPNMB-202ENST00000381990 CDH16O75309 829 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 SKAP2O75563 359 aaPredicted RBP9.47□□□□□ -0.89
GPNMB-202ENST00000381990 ARIH2O95376 493 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 FTLP02792 175 aaPredicted RBP9.47□□□□□ -0.89
GPNMB-202ENST00000381990 CYP2C8P10632 490 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 GZMAP12544 262 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 BRAFP15056 766 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 ARL2P36404 184 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 NAMPTP43490 491 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 RASSF2P50749 326 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 FKBP1BP68106 108 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 CCNA1P78396 465 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 MRPS35P82673 323 aaKnown RBP9.47□□□□□ -0.89
GPNMB-202ENST00000381990 TAF11Q15544 211 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 EPC2Q52LR7 807 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 CELF3Q5SZQ8 465 aaKnown RBP9.47□□□□□ -0.89
GPNMB-202ENST00000381990 TAS1R3Q7RTX0 852 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 CBWD2Q8IUF1 395 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 KIF2BQ8N4N8 673 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 GPRC5AQ8NFJ5 357 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 TMC2Q8TDI7 906 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 POMGNT1Q8WZA1 660 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 TMEM143Q96AN5 459 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 RNPEPL1Q9HAU8 725 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 ETNK1Q9HBU6 452 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 TAS2R14Q9NYV8 317 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 ZFATQ9P243 1243 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 ASB14A6NK59 587 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 FESP07332 822 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 COMTP21964 271 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 CALB2P22676 271 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 GCLMP48507 274 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 MXI1P50539 228 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 GTF2A2P52657 109 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms