RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 COILP38432 576 aaPredicted RBP22.92■■□□□ 1.26
TRIM54-202ENST00000380075 C1QBPQ07021 282 aaKnown RBP22.92■■□□□ 1.26
TRIM54-202ENST00000380075 DRP2Q13474 957 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 TFDP1Q14186 410 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 DHX37Q8IY37 1157 aaKnown RBP22.92■■□□□ 1.26
TRIM54-202ENST00000380075 SLCO2A1Q92959 643 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 CYFIP2Q96F07 1278 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 FAM84AQ96KN4 292 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 NUB1Q9Y5A7 615 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 ASS1P00966 412 aaKnown RBP22.92■■□□□ 1.26
TRIM54-202ENST00000380075 MAN1A1P33908 653 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 FLT3P36888 993 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 GNGT1P63211 74 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 ACVR2BQ13705 512 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 SIX1Q15475 284 aaPredicted RBP22.92■■□□□ 1.26
TRIM54-202ENST00000380075 MAP3K21Q5TCX8 1036 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 AGBL2Q5U5Z8 902 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 TCHPQ9BT92 498 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 TRIM31Q9BZY9 425 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 ABHD16BQ9H3Z7 469 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 SMARCAD1Q9H4L7 1026 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 LCMT1Q9UIC8 334 aa22.92■■□□□ 1.26
TRIM54-202ENST00000380075 PROSCO94903 275 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 ZNF865P0CJ78 1059 aaPredicted RBP22.91■■□□□ 1.26
TRIM54-202ENST00000380075 CYBAP13498 195 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 ZNF132P52740 706 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 ZNF844Q08AG5 666 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 PLCB4Q15147 1175 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 HSDL1Q3SXM5 330 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 KCTD16Q68DU8 428 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 CCDC62Q6P9F0 684 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 ZDHHC14Q8IZN3 488 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 UBR7Q8N806 425 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 RNF149Q8NC42 400 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 PDGFCQ9NRA1 345 aa22.91■■□□□ 1.26
TRIM54-202ENST00000380075 MTRF1LQ9UGC7 380 aaKnown RBP22.91■■□□□ 1.26
TRIM54-202ENST00000380075 ZBTB42B2RXF5 422 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 ASAP2O43150 1006 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 HBP1O60381 514 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 RARAP10276 462 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 HARSP12081 509 aaKnown RBP22.9■■□□□ 1.26
TRIM54-202ENST00000380075 CCND3P30281 292 aaPredicted RBP22.9■■□□□ 1.26
TRIM54-202ENST00000380075 MKRN4PQ13434 485 aaPredicted RBP22.9■■□□□ 1.26
TRIM54-202ENST00000380075 DUOXA2Q1HG44 320 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 TTC27Q6P3X3 843 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 CCDC105Q8IYK2 499 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 SH2D3CQ8N5H7 860 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.9■■□□□ 1.26
TRIM54-202ENST00000380075 SPATA33Q96N06 139 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 ADAM22Q9P0K1 906 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 CPSF3Q9UKF6 684 aaKnown RBP22.9■■□□□ 1.26
TRIM54-202ENST00000380075 PSTPIP1O43586 416 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 MTFR1Q15390 333 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 PLEKHA7Q6IQ23 1121 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 TAPT1Q6NXT6 567 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 TSHZ1Q6ZSZ6 1077 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 SYDE1Q6ZW31 735 aaPredicted RBP22.9■■□□□ 1.26
TRIM54-202ENST00000380075 GRIN2DO15399 1336 aa22.9■■□□□ 1.26
TRIM54-202ENST00000380075 ABLIM1O14639 778 aa22.89■■□□□ 1.26
TRIM54-202ENST00000380075 THAP12O43422 761 aa22.89■■□□□ 1.26
TRIM54-202ENST00000380075 ECEL1O95672 775 aa22.89■■□□□ 1.26
TRIM54-202ENST00000380075 CALCAP01258 141 aa22.89■■□□□ 1.26
TRIM54-202ENST00000380075 PROZP22891 400 aa22.89■■□□□ 1.26
TRIM54-202ENST00000380075 MARK3P27448 753 aa22.89■■□□□ 1.26
TRIM54-202ENST00000380075 SGSM1Q2NKQ1 1148 aa22.89■■□□□ 1.26
TRIM54-202ENST00000380075 MPZL3Q6UWV2 235 aa22.89■■□□□ 1.26
TRIM54-202ENST00000380075 ZDHHC24Q6UX98 284 aa22.89■■□□□ 1.26
TRIM54-202ENST00000380075 GRHL1Q9NZI5 618 aa22.89■■□□□ 1.26
TRIM54-202ENST00000380075 SNX24Q9Y343 169 aa22.89■■□□□ 1.26
TRIM54-202ENST00000380075 SRRM3A6NNA2 597 aaPredicted RBP22.89■■□□□ 1.25
TRIM54-202ENST00000380075 ACKR2O00590 384 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 LSM8O95777 96 aaKnown RBP22.89■■□□□ 1.25
TRIM54-202ENST00000380075 NUDT17P0C025 328 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 SRGAP2CP0DJJ0 459 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 TTLL4Q14679 1199 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 CROCCP2Q86T23 111 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 CPNE8Q86YQ8 564 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 ARMC5Q96C12 935 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 ZNF333Q96JL9 665 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 NIF3L1Q9GZT8 377 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 FZD8Q9H461 694 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 VTA1Q9NP79 307 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 HOMER3Q9NSC5 361 aa22.89■■□□□ 1.25
TRIM54-202ENST00000380075 MCM3APO60318 1980 aa22.88■■□□□ 1.25
TRIM54-202ENST00000380075 ZEB2O60315 1214 aa22.88■■□□□ 1.25
TRIM54-202ENST00000380075 TNFSF9P41273 254 aa22.88■■□□□ 1.25
TRIM54-202ENST00000380075 PLTPP55058 493 aa22.88■■□□□ 1.25
TRIM54-202ENST00000380075 TMEM63BQ5T3F8 832 aa22.88■■□□□ 1.25
TRIM54-202ENST00000380075 ZBTB33Q86T24 672 aa22.88■■□□□ 1.25
TRIM54-202ENST00000380075 C11orf70Q9BRQ4 267 aa22.88■■□□□ 1.25
TRIM54-202ENST00000380075 NFKBIZQ9BYH8 718 aa22.88■■□□□ 1.25
TRIM54-202ENST00000380075 UNC93B1Q9H1C4 597 aa22.88■■□□□ 1.25
TRIM54-202ENST00000380075 PABPC3Q9H361 631 aaKnown RBP22.88■■□□□ 1.25
TRIM54-202ENST00000380075 PARVAQ9NVD7 372 aa22.88■■□□□ 1.25
TRIM54-202ENST00000380075 FEZ2Q9UHY8 353 aaPredicted RBP22.88■■□□□ 1.25
TRIM54-202ENST00000380075 ATP8A1Q9Y2Q0 1164 aa22.88■■□□□ 1.25
TRIM54-202ENST00000380075 TTLL13PA6NNM8 815 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 RPL21P46778 160 aaKnown RBP22.87■■□□□ 1.25
TRIM54-202ENST00000380075 PMS2P54278 862 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 MAMLD1Q13495 774 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms