RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 APRTP07741 180 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 MAGEA9P43362 315 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 GJB7Q6PEY0 223 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 ATP6V1G3Q96LB4 118 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 ORC6Q9Y5N6 252 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 ZNF185O15231 689 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 TADA3O75528 432 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 CD44P16070 742 aaKnown RBP18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 FIGNQ5HY92 759 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 FAM47EQ6ZV65 393 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 MIPOL1Q8TD10 442 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 TMEM169Q96HH4 297 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 MS4A14Q96JA4 679 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 EPC1Q9H2F5 836 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 OLA1Q9NTK5 396 aaKnown RBP18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 PAK5Q9P286 719 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 MTSS1O43312 755 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 OPHN1O60890 802 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 B3GAT3O94766 335 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 HOXC6P09630 235 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 TBC1D1Q86TI0 1168 aaPredicted RBP18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 TTC30BQ8N4P2 665 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 P2RX7Q99572 595 aaKnown RBP18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 MTMR12Q9C0I1 747 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 RRAGCQ9HB90 399 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 TRIM33Q9UPN9 1127 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 ADM5C9JUS6 153 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 VDRP11473 427 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 TM4SF1P30408 202 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 CDR2Q01850 454 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 SEZ6Q53EL9 994 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 TRIM68Q6AZZ1 485 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 EGFL8Q99944 293 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 ASCC2Q9H1I8 757 aaPredicted RBP18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 UPF3AQ9H1J1 476 aaKnown RBP18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 TPX2Q9ULW0 747 aaKnown RBP18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 SH3BP1Q9Y3L3 701 aa18.77■□□□□ 0.59
CLSTN1-202ENST00000377298 EPC2Q52LR7 807 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 GLRA4Q5JXX5 417 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 TRMT10CQ7L0Y3 403 aaKnown RBP18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 NUDCD3Q8IVD9 361 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 C1orf131Q8NDD1 294 aaKnown RBP18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 METTL5Q9NRN9 209 aaKnown RBP18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 VTNP04004 478 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 C4orf22Q6V702 233 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 GIPC2Q8TF65 315 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 SCFD1Q8WVM8 642 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 NDFIP2Q9NV92 336 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 H7C4K7 107 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 NCAM1P13591 858 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 UGP2Q16851 508 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 MKL1Q969V6 931 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 ABHD16BQ9H3Z7 469 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 ALDH5A1P51649 535 aaPredicted RBP18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 MDM2Q00987 491 aaPredicted RBP18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 CENPCQ03188 943 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 SLC30A10Q6XR72 485 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 WDR49Q8IV35 697 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 PABPC5Q96DU9 382 aaKnown RBP18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 SEMA6BQ9H3T3 888 aa18.76■□□□□ 0.59
CLSTN1-202ENST00000377298 TTC36A6NLP5 189 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 SPECC1L-ADORA2AF8WAN1 911 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 HARS2P49590 506 aaKnown RBP18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 IL31Q6EBC2 164 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 SPDL1Q96EA4 605 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 AGAP3Q96P47 875 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 TRIM10Q9UDY6 481 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 FOXN3O00409 490 aaPredicted RBP18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 SLC2A3P11169 496 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 RHBDL3P58872 404 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 IL1RL1Q01638 556 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 IMPG1Q17R60 797 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 TDRD10Q5VZ19 366 aaKnown RBP18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 SPATA18Q8TC71 538 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 SLC5A5Q92911 643 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 RBM15Q96T37 977 aaKnown RBP eCLIP18.75■□□□□ 0.594e-6■■□□□ 13.2
CLSTN1-202ENST00000377298 CASP4P49662 377 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 CDCA5Q96FF9 252 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 SLC13A1Q9BZW2 595 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 FAM198AQ9UFP1 575 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 ATMINO43313 823 aaPredicted RBP18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 CST8O60676 142 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 SMIM24O75264 130 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 TMCC1O94876 653 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 LAMTOR4Q0VGL1 99 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 ZFPM1Q8IX07 1006 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 SOCS4Q8WXH5 440 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 PPCSQ9HAB8 311 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.75■□□□□ 0.593e-6■■■□□ 19.1
CLSTN1-202ENST00000377298 SLC13A4Q9UKG4 626 aa18.75■□□□□ 0.59
CLSTN1-202ENST00000377298 TMEM247A6NEH6 219 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 ATP5HO75947 161 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 PTPRAP18433 802 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 GCKP35557 465 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 RBM43Q6ZSC3 357 aaKnown RBP18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 SNX19Q92543 992 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 DNAJC7Q99615 494 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 ZNF518BQ9C0D4 1074 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 RARRES1P49788 294 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms