RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 ATP9AO75110 1047 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 SLITRK3O94933 977 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 KNOP1Q1ED39 458 aaKnown RBP11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 ARHGEF18Q6ZSZ5 1173 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 PRELID2Q8N945 189 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 KIFAP3Q92845 792 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 MRRFQ96E11 262 aaKnown RBP11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 POP1Q99575 1024 aaKnown RBP11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 TMEM206Q9H813 350 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 TNFAIP3P21580 790 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 IFRD2Q12894 506 aaPredicted RBP11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 TRIP13Q15645 432 aaPredicted RBP11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 SEPT7Q16181 437 aaKnown RBP11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 KYNUQ16719 465 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 SH3D19Q5HYK7 790 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 SPRYD7Q5W111 196 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 CGB2Q6NT52 195 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 FAM186BQ8IYM0 893 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 TAB3Q8N5C8 712 aaPredicted RBP11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 ANKLE1Q8NAG6 615 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 FAM167AQ96KS9 214 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 METTL14Q9HCE5 456 aaKnown RBP11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 PASKQ96RG2 1323 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 THAP12O43422 761 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 PSMD10O75832 226 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 MAPK4P31152 587 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 HOXA7P31268 230 aaPredicted RBP11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 PRKCIP41743 596 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 SERPINB4P48594 390 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 USP4Q13107 963 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 MESDQ14696 234 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 LY6KQ17RY6 165 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 MTHFD1LQ6UB35 978 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 PHLDB2Q86SQ0 1253 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 UBL4BQ8N7F7 174 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 ASAP3Q8TDY4 903 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 GBP5Q96PP8 586 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 NMRK1Q9NWW6 199 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 SEL1LQ9UBV2 794 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 TTC7AQ9ULT0 858 aaPredicted RBP11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 ALG6Q9Y672 507 aa11.83□□□□□ -0.52
RPRD1B-201ENST00000373433 GON4LQ3T8J9 2241 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 SYNGAP1Q96PV0 1343 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 STRNO43815 780 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 TCF7P36402 384 aaPredicted RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 SKIV2L2P42285 1042 aaKnown RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 PTGIRP43119 386 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 CASP5P51878 434 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 MRPS9P82933 396 aaKnown RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 PPP2R5CQ13362 524 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 LBRQ14739 615 aaKnown RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 MTFR1Q15390 333 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 TBC1D25Q3MII6 688 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 RNF43Q68DV7 783 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 NIPA1Q7RTP0 329 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 SMC1BQ8NDV3 1235 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 LRMDAQ9H2I8 198 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 TAS2R14Q9NYV8 317 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 PRKAG3Q9UGI9 489 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 USTQ9Y2C2 406 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 DIS3Q9Y2L1 958 aaKnown RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 UBIAD1Q9Y5Z9 338 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 NRXN2Q9P2S2 1712 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 LRRC37AA6NMS7 1700 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 COL4A5P29400 1685 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 DENND3A2RUS2 1198 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 TMEM150BA6NC51 233 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 LRRN2O75325 713 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 SPAG7O75391 227 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 DRG2P55039 364 aaKnown RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 MFSD5Q6N075 450 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 DTX3LQ8TDB6 740 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 TMEM143Q96AN5 459 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 ROPN1BQ9BZX4 212 aaPredicted RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 FAM49AQ9H0Q0 323 aaPredicted RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 PORCNQ9H237 461 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 KCTD10Q9H3F6 313 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 DENND2DQ9H6A0 471 aaPredicted RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 ROPN1Q9HAT0 212 aaPredicted RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 INTUQ9ULD6 942 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 TCRBV7S2A1N4TA0A589 114 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 MAPK13O15264 365 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 SLC26A4O43511 780 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 DGAT1O75907 488 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 BCRP11274 1271 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 ACADSP16219 412 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 PSMC2P35998 433 aaKnown RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 CASP4P49662 377 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 ZC2HC1CQ53FD0 456 aaPredicted RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 RASIP1Q5U651 963 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 HAUS6Q7Z4H7 955 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 RBBP8NLQ8NC74 664 aaPredicted RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 STOML1Q9UBI4 398 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 RGPD3A6NKT7 1758 aaPredicted RBP11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 RGPD4Q7Z3J3 1758 aa11.82□□□□□ -0.52
RPRD1B-201ENST00000373433 GOLGA8IPA6NC78 632 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 GOLGA8JA6NMD2 632 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms