RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 PRR5LQ6MZQ0 368 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 DCAF4Q8WV16 495 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 KIFAP3Q92845 792 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 SAE1Q9UBE0 346 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-201ENST00000369407 SEL1LQ9UBV2 794 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 SCOCQ9UIL1 159 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 TAF1LQ8IZX4 1826 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 E7ENQ6 273 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 GYS1P13807 737 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 AMPD1P23109 780 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 SERPINB4P48594 390 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 PLCB3Q01970 1234 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 KLF1Q13351 362 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-201ENST00000369407 MCOLN2Q8IZK6 566 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 ZCCHC9Q8N567 271 aaKnown RBP12.99□□□□□ -0.33
PHGDH-201ENST00000369407 CHCHD3Q9NX63 227 aaKnown RBP12.99□□□□□ -0.33
PHGDH-201ENST00000369407 WDR35Q9P2L0 1181 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 ACTL7BQ9Y614 415 aa12.99□□□□□ -0.33
PHGDH-201ENST00000369407 GSC2O15499 205 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 HAUS5O94927 633 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 RTN3O95197 1032 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-201ENST00000369407 KLRC2P26717 231 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 ADSSP30520 456 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 SOX10P56693 466 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 SNRNP35Q16560 246 aaKnown RBP12.98□□□□□ -0.33
PHGDH-201ENST00000369407 FYB2Q5VWT5 728 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 LRRC74BQ6ZQY2 392 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 HAUS6Q7Z4H7 955 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 SLC9A9Q8IVB4 645 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 GALNT15Q8N3T1 639 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 FBXO27Q8NI29 283 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 TCP10LQ8TDR4 215 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 FBXO41Q8TF61 875 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 FGD4Q96M96 766 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 DNAJC5Q9H3Z4 198 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-201ENST00000369407 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.98□□□□□ -0.33
PHGDH-201ENST00000369407 PIK3CDO00329 1044 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 MUTP22033 750 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 TFDP1Q14186 410 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 LBRQ14739 615 aaKnown RBP12.98□□□□□ -0.33
PHGDH-201ENST00000369407 ZYXQ15942 572 aaKnown RBP12.98□□□□□ -0.33
PHGDH-201ENST00000369407 APOBEC3HQ6NTF7 200 aaKnown RBP12.98□□□□□ -0.33
PHGDH-201ENST00000369407 CLPTM1LQ96KA5 538 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 FAM210AQ96ND0 272 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 ANKRD27Q96NW4 1050 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 NT5C1BQ96P26 610 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 ACCSQ96QU6 501 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 CYTH2Q99418 400 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 BTBD10Q9BSF8 475 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 STRA6Q9BX79 667 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 VCXQ9H320 206 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 PRR12Q9ULL5 1215 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 CNTNAP4Q9C0A0 1308 aa12.98□□□□□ -0.33
PHGDH-201ENST00000369407 PRPF4O43172 522 aaKnown RBP eCLIP12.97□□□□□ -0.333e-6■■■■□ 19.9
PHGDH-201ENST00000369407 TYROBPO43914 113 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 PSMG1O95456 288 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 SLC45A4Q5BKX6 768 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 SPOPLQ6IQ16 392 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 SYDE1Q6ZW31 735 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-201ENST00000369407 MYLK4Q86YV6 388 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-201ENST00000369407 MFN1Q8IWA4 741 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
PHGDH-201ENST00000369407 TMEM121Q9BTD3 319 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 CYLDQ9NQC7 956 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 PCMTD2Q9NV79 361 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 LARSQ9P2J5 1176 aaKnown RBP12.97□□□□□ -0.33
PHGDH-201ENST00000369407 EP400Q96L91 3159 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 C2CD2LO14523 706 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 MAN1A1P33908 653 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 ECE1P42892 770 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 PPP2R5CQ13362 524 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 CCNG2Q16589 344 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 IRGCQ6NXR0 463 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 DRAXINQ8NBI3 349 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-201ENST00000369407 STMN2Q93045 179 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-201ENST00000369407 LRCH1Q9Y2L9 728 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 ATRNL1Q5VV63 1379 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 GH2P01242 217 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 TROVE2P10155 538 aaKnown RBP eCLIP12.97□□□□□ -0.33
PHGDH-201ENST00000369407 SKIP12755 728 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 ETS2P15036 469 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 DYNLT1P63172 113 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 SGSM1Q2NKQ1 1148 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 SLC25A41Q8N5S1 370 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 TAS2R1Q9NYW7 299 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 ANKFY1Q9P2R3 1169 aa12.97□□□□□ -0.33
PHGDH-201ENST00000369407 IPO5O00410 1097 aaKnown RBP12.96□□□□□ -0.33
PHGDH-201ENST00000369407 CCDC22O60826 627 aa12.96□□□□□ -0.33
PHGDH-201ENST00000369407 USP1O94782 785 aa12.96□□□□□ -0.33
PHGDH-201ENST00000369407 GPX6P59796 221 aa12.96□□□□□ -0.33
PHGDH-201ENST00000369407 SLC34A1Q06495 639 aa12.96□□□□□ -0.33
PHGDH-201ENST00000369407 CEP55Q53EZ4 464 aa12.96□□□□□ -0.33
PHGDH-201ENST00000369407 KRT39Q6A163 491 aa12.96□□□□□ -0.33
PHGDH-201ENST00000369407 C15orf52Q6ZUT6 534 aaKnown RBP12.96□□□□□ -0.33
PHGDH-201ENST00000369407 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.33
PHGDH-201ENST00000369407 ARL10Q8N8L6 244 aa12.96□□□□□ -0.33
PHGDH-201ENST00000369407 TTC17Q96AE7 1141 aa12.96□□□□□ -0.33
PHGDH-201ENST00000369407 TMEM120AQ9BXJ8 343 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms