RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 C11orf49Q9H6J7 331 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 DUSP10Q9Y6W6 482 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 INPPL1O15357 1258 aa25.52■■□□□ 1.68
SNX3-203ENST00000368979 CAPN2P17655 700 aa25.52■■□□□ 1.68
SNX3-203ENST00000368979 SCNN1GP51170 649 aa25.52■■□□□ 1.68
SNX3-203ENST00000368979 RNF169Q8NCN4 708 aa25.52■■□□□ 1.68
SNX3-203ENST00000368979 WNT8AQ9H1J5 351 aa25.52■■□□□ 1.68
SNX3-203ENST00000368979 TAS2R14Q9NYV8 317 aa25.52■■□□□ 1.68
SNX3-203ENST00000368979 SCN1AP35498 2009 aa25.52■■□□□ 1.68
SNX3-203ENST00000368979 BTNL10A8MVZ5 291 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 FANCGO15287 622 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 CILPO75339 1184 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 EOMESO95936 686 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 H2AFZP0C0S5 128 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 GZMAP12544 262 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 INCA1Q0VD86 236 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.51■■□□□ 1.67
SNX3-203ENST00000368979 H2AFVQ71UI9 128 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 DNAAF5Q86Y56 855 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 DBF4BQ8NFT6 615 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 WHAMMQ8TF30 809 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 APBB2Q92870 758 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 ISCUQ9H1K1 167 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 TBX21Q9UL17 535 aa25.51■■□□□ 1.67
SNX3-203ENST00000368979 PARNO95453 639 aaKnown RBP25.5■■□□□ 1.67
SNX3-203ENST00000368979 TAF6P49848 677 aa25.5■■□□□ 1.67
SNX3-203ENST00000368979 TTC39CQ8N584 583 aa25.5■■□□□ 1.67
SNX3-203ENST00000368979 SEPT8Q92599 483 aa25.5■■□□□ 1.67
SNX3-203ENST00000368979 PAWRQ96IZ0 340 aaKnown RBP25.5■■□□□ 1.67
SNX3-203ENST00000368979 WDR24Q96S15 920 aa25.5■■□□□ 1.67
SNX3-203ENST00000368979 GDAP2Q9NXN4 497 aa25.5■■□□□ 1.67
SNX3-203ENST00000368979 DNAI1Q9UI46 699 aa25.5■■□□□ 1.67
SNX3-203ENST00000368979 SNX9Q9Y5X1 595 aa25.5■■□□□ 1.67
SNX3-203ENST00000368979 CXCL10P02778 98 aa25.49■■□□□ 1.67
SNX3-203ENST00000368979 GALCP54803 685 aa25.49■■□□□ 1.67
SNX3-203ENST00000368979 ZNF394Q53GI3 561 aa25.49■■□□□ 1.67
SNX3-203ENST00000368979 ZNF569Q5MCW4 686 aa25.49■■□□□ 1.67
SNX3-203ENST00000368979 SECISBP2LQ93073 1101 aaKnown RBP25.49■■□□□ 1.67
SNX3-203ENST00000368979 MMS19Q96T76 1030 aa25.49■■□□□ 1.67
SNX3-203ENST00000368979 SALL4Q9UJQ4 1053 aa25.49■■□□□ 1.67
SNX3-203ENST00000368979 ATP11BQ9Y2G3 1177 aa25.49■■□□□ 1.67
SNX3-203ENST00000368979 MACROD2A1Z1Q3 448 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 TMCO5BA8MYB1 307 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 SPTLC1O15269 473 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 RTN2O75298 545 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 PAEPP09466 180 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 RAD23BP54727 409 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 GRIK3Q13003 919 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 CLEC16AQ2KHT3 1053 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 SV2CQ496J9 727 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 KIF18AQ8NI77 898 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 ZNF592Q92610 1267 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 SCLYQ96I15 445 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 TWNKQ96RR1 684 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 PPP1R12CQ9BZL4 782 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 HMGXB4Q9UGU5 601 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 BARX2Q9UMQ3 279 aaPredicted RBP25.48■■□□□ 1.67
SNX3-203ENST00000368979 PAXBP1Q9Y5B6 917 aa25.48■■□□□ 1.67
SNX3-203ENST00000368979 KPNA7A9QM74 516 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 THAP12O43422 761 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 CYP1A1P04798 512 aaPredicted RBP25.47■■□□□ 1.67
SNX3-203ENST00000368979 TMEM253P0C7T8 217 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 IBSPP21815 317 aaPredicted RBP25.47■■□□□ 1.67
SNX3-203ENST00000368979 LRRC26Q2I0M4 334 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 SLC35F6Q8N357 371 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 ZNF606Q8WXB4 792 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 TMEM106CQ9BVX2 250 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 ELOVL4Q9GZR5 314 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 SCN5AQ14524 2016 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 ANKRD62A6NC57 917 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 UNGP13051 313 aaPredicted RBP25.47■■□□□ 1.67
SNX3-203ENST00000368979 CCL23P55773 120 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 LILRA4P59901 499 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 TCTN1Q2MV58 587 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 TRIM72Q6ZMU5 477 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 LIMS2Q7Z4I7 341 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 RNF10Q8N5U6 811 aaKnown RBP25.47■■□□□ 1.67
SNX3-203ENST00000368979 SLC4A11Q8NBS3 891 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 ZSWIM1Q9BR11 485 aa25.47■■□□□ 1.67
SNX3-203ENST00000368979 ELAC1Q9H777 363 aaKnown RBP25.47■■□□□ 1.67
SNX3-203ENST00000368979 NCANO14594 1321 aa25.46■■□□□ 1.67
SNX3-203ENST00000368979 TDRD15B5MCY1 1934 aaKnown RBP25.46■■□□□ 1.67
SNX3-203ENST00000368979 A0A0A6YYK5 440 aaPredicted RBP25.46■■□□□ 1.67
SNX3-203ENST00000368979 ENPP3O14638 875 aa25.46■■□□□ 1.67
SNX3-203ENST00000368979 FTLP02792 175 aaPredicted RBP25.46■■□□□ 1.67
SNX3-203ENST00000368979 CLTBP09497 229 aa25.46■■□□□ 1.67
SNX3-203ENST00000368979 BRD2P25440 801 aaKnown RBP25.46■■□□□ 1.67
SNX3-203ENST00000368979 CYP2C18P33260 490 aa25.46■■□□□ 1.67
SNX3-203ENST00000368979 SOWAHAQ2M3V2 549 aa25.46■■□□□ 1.67
SNX3-203ENST00000368979 TMEM176AQ96HP8 235 aa25.46■■□□□ 1.67
SNX3-203ENST00000368979 MRPL45Q9BRJ2 306 aaKnown RBP25.46■■□□□ 1.67
SNX3-203ENST00000368979 TMEM161AQ9NX61 479 aa25.46■■□□□ 1.67
SNX3-203ENST00000368979 PUF60Q9UHX1 559 aaKnown RBP25.46■■□□□ 1.67
SNX3-203ENST00000368979 CAPN6Q9Y6Q1 641 aa25.46■■□□□ 1.67
SNX3-203ENST00000368979 PODXLO00592 558 aa25.45■■□□□ 1.66
SNX3-203ENST00000368979 POMCP01189 267 aa25.45■■□□□ 1.66
SNX3-203ENST00000368979 CFHP08603 1231 aa25.45■■□□□ 1.66
SNX3-203ENST00000368979 RPL9P32969 192 aaKnown RBP25.45■■□□□ 1.66
SNX3-203ENST00000368979 CLCNKBP51801 687 aa25.45■■□□□ 1.66
SNX3-203ENST00000368979 NDST1P52848 882 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms