RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 TFR2Q9UP52 801 aa17.34■□□□□ 0.37
SCAF8-201ENST00000367178 SH3BGRP55822 239 aaPredicted RBP17.33■□□□□ 0.37
SCAF8-201ENST00000367178 HSP90AA5PQ58FG0 334 aa17.33■□□□□ 0.37
SCAF8-201ENST00000367178 ACAD10Q6JQN1 1059 aa17.33■□□□□ 0.37
SCAF8-201ENST00000367178 KRT80Q6KB66 452 aa17.33■□□□□ 0.37
SCAF8-201ENST00000367178 MPZL3Q6UWV2 235 aa17.33■□□□□ 0.37
SCAF8-201ENST00000367178 DDX27Q96GQ7 796 aaKnown RBP17.33■□□□□ 0.37
SCAF8-201ENST00000367178 CLMNQ96JQ2 1002 aa17.33■□□□□ 0.37
SCAF8-201ENST00000367178 MTMR12Q9C0I1 747 aa17.33■□□□□ 0.37
SCAF8-201ENST00000367178 THAP2Q9H0W7 228 aa17.33■□□□□ 0.37
SCAF8-201ENST00000367178 DEPDC5O75140 1603 aa17.33■□□□□ 0.36
SCAF8-201ENST00000367178 RAD51CO43502 376 aa17.33■□□□□ 0.36
SCAF8-201ENST00000367178 THPOP40225 353 aa17.33■□□□□ 0.36
SCAF8-201ENST00000367178 KCNJ1P48048 391 aa17.33■□□□□ 0.36
SCAF8-201ENST00000367178 SLC26A2P50443 739 aa17.33■□□□□ 0.36
SCAF8-201ENST00000367178 APOBEC3HQ6NTF7 200 aaKnown RBP17.33■□□□□ 0.36
SCAF8-201ENST00000367178 USP38Q8NB14 1042 aa17.33■□□□□ 0.36
SCAF8-201ENST00000367178 SCFD1Q8WVM8 642 aa17.33■□□□□ 0.36
SCAF8-201ENST00000367178 PAK5Q9P286 719 aa17.33■□□□□ 0.36
SCAF8-201ENST00000367178 XPO7Q9UIA9 1087 aaKnown RBP17.33■□□□□ 0.36
SCAF8-201ENST00000367178 GCKP35557 465 aa17.33■□□□□ 0.36
SCAF8-201ENST00000367178 PDK1Q15118 436 aa17.33■□□□□ 0.36
SCAF8-201ENST00000367178 DYRK4Q9NR20 520 aa17.33■□□□□ 0.36
SCAF8-201ENST00000367178 GOLGA8RI6L899 631 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 PSMD3O43242 534 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 AGTP01019 485 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 HSPA9P38646 679 aaKnown RBP17.32■□□□□ 0.36
SCAF8-201ENST00000367178 MKRN4PQ13434 485 aaPredicted RBP17.32■□□□□ 0.36
SCAF8-201ENST00000367178 KIZQ2M2Z5 673 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 ADAM33Q9BZ11 813 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 ALDH1A1P00352 501 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 DSG3P32926 999 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 CDR2Q01850 454 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 TAF11Q15544 211 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 METTL7BQ6UX53 244 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 TSR3Q9UJK0 312 aaKnown RBP17.32■□□□□ 0.36
SCAF8-201ENST00000367178 KIF20BQ96Q89 1820 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 TRPA1O75762 1119 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 CD302Q8IX05 232 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 VGLL2Q8N8G2 317 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 CCDC138Q96M89 665 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 DNAJC7Q99615 494 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 FOXP3Q9BZS1 431 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 CARD9Q9H257 536 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 L3MBTL1Q9Y468 752 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 ESRRBO95718 433 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 NCAM1P13591 858 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 RBM43Q6ZSC3 357 aaKnown RBP17.32■□□□□ 0.36
SCAF8-201ENST00000367178 OPTNQ96CV9 577 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 SLC4A9Q96Q91 983 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 TRIM15Q9C019 465 aa17.32■□□□□ 0.36
SCAF8-201ENST00000367178 DNAJC6O75061 913 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 SMIM24O75264 130 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 DNERQ8NFT8 737 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 KRT35Q92764 455 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 PPP2R3CQ969Q6 453 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 NCLNQ969V3 563 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 AFF4Q9UHB7 1163 aaKnown RBP17.31■□□□□ 0.36
SCAF8-201ENST00000367178 B3GAT3O94766 335 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 CYP2C8P10632 490 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 TAL1P17542 331 aaPredicted RBP17.31■□□□□ 0.36
SCAF8-201ENST00000367178 HADHAP40939 763 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 HERVK_113P62684 666 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 ERVK-24P63145 666 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.31■□□□□ 0.36
SCAF8-201ENST00000367178 BOLA3Q53S33 107 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 FIGNQ5HY92 759 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 TMCO4Q5TGY1 634 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 IL31Q6EBC2 164 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 RNF217Q8TC41 542 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 SLITRK1Q96PX8 696 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 VIPAS39Q9H9C1 493 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 CCDC78A2IDD5 438 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 TMEM247A6NEH6 219 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 MGEA5O60502 916 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 UGP2Q16851 508 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 NUDT18Q6ZVK8 323 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 STKLD1Q8NE28 680 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 TPCN2Q8NHX9 752 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 ERP44Q9BS26 406 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 SMYD3Q9H7B4 428 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 ALG13Q9NP73 1137 aaKnown RBP17.31■□□□□ 0.36
SCAF8-201ENST00000367178 KRT82Q9NSB4 513 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 ARHGEF28Q8N1W1 1705 aaKnown RBP17.31■□□□□ 0.36
SCAF8-201ENST00000367178 AKAP3O75969 853 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 SGPL1O95470 568 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 GUCY1A3Q02108 690 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 LRRC43Q8N309 656 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 GRAMD1AQ96CP6 724 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 RMDN2Q96LZ7 410 aa17.31■□□□□ 0.36
SCAF8-201ENST00000367178 ZC3H11AO75152 810 aaKnown RBP eCLIP17.3■□□□□ 0.363e-8■■■■□ 26.2
SCAF8-201ENST00000367178 PHEXP78562 749 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 PGM5Q15124 567 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 MAPRE1Q15691 268 aaKnown RBP17.3■□□□□ 0.36
SCAF8-201ENST00000367178 EARS2Q5JPH6 523 aaKnown RBP17.3■□□□□ 0.36
SCAF8-201ENST00000367178 CYP2W1Q8TAV3 490 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 TMC2Q8TDI7 906 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 CCDC124Q96CT7 223 aaKnown RBP17.3■□□□□ 0.36
SCAF8-201ENST00000367178 CELF4Q9BZC1 486 aaKnown RBP17.3■□□□□ 0.36
SCAF8-201ENST00000367178 AIPL1Q9NZN9 384 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms