RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TOR1BO14657 336 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 KIAA0355O15063 1070 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 PRAMEF10O60809 474 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 RHOBTB3O94955 611 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 MATN4O95460 622 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 ESRRBO95718 433 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 GNAI3P08754 354 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 TYRP14679 529 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 CHRM3P20309 590 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 TGM1P22735 817 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 CYP2C19P33261 490 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 PIK3CGP48736 1102 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 GNAI1P63096 354 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 MPP3Q13368 585 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 PLS1Q14651 629 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 LRRC41Q15345 812 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 THEMIS2Q5TEJ8 643 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 TAPT1Q6NXT6 567 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 Q6ZNX1 250 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 CLNKQ7Z7G1 428 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 COLGALT2Q8IYK4 626 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 AOPEPQ8N6M6 819 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 PCSK9Q8NBP7 692 aaKnown RBP5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 PLBD2Q8NHP8 589 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 FUBP1Q96AE4 644 aaKnown RBP5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 COQ10AQ96MF6 247 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 MAP3K14Q99558 947 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 SLC12A5Q9H2X9 1139 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 SMOC2Q9H3U7 446 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 PNPOQ9NVS9 261 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 SIDT1Q9NXL6 827 aaKnown RBP5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 NOB1Q9ULX3 412 aaKnown RBP5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 COL11A2P13942 1736 aaPredicted RBP5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 CCDC195A0A1B0GUA6 201 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 POLRMTO00411 1230 aaKnown RBP5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 SLC16A6O15403 523 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 OFD1O75665 1012 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 KIF20AO95235 890 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 HDCP19113 662 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 INHBEP58166 350 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 EXOSC9Q06265 439 aaKnown RBP5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 DYRK1AQ13627 763 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 HABP2Q14520 560 aaPredicted RBP5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 SMN1Q16637 294 aaKnown RBP5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 ATAT1Q5SQI0 421 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 ODR4Q5SWX8 454 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 LPIN2Q92539 896 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 NUP88Q99567 741 aaPredicted RBP5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 CGRRF1Q99675 332 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 ZNHIT2Q9UHR6 403 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 PCDHA6Q9UN73 950 aa5.84□□□□□ -1.47
RNU4-28P-201ENST00000364739 A0A1W2PS29 197 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 PRPF3O43395 683 aaKnown RBP5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 NUDT3O95989 172 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 LMNAP02545 664 aaKnown RBP5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 CLK3P49761 638 aaKnown RBP5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 HNRNPMP52272 730 aaKnown RBP eCLIP5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 RPS7P62081 194 aaKnown RBP5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 NKX6-1P78426 367 aaPredicted RBP5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 KIF22Q14807 665 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 PLEKHG6Q3KR16 790 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 PREPLQ4J6C6 727 aaPredicted RBP5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 SP5Q6BEB4 398 aaPredicted RBP5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 PDSS2Q86YH6 399 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 ADGRG5Q8IZF4 528 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 PPP1R35Q8TAP8 253 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 SCAMP4Q969E2 229 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 SLC35A4Q96G79 324 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 SMOQ99835 787 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 WDCPQ9H6R7 721 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 KMT5AQ9NQR1 393 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 ANLNQ9NQW6 1124 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 GNL3LQ9NVN8 582 aaKnown RBP5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 KCTD5Q9NXV2 234 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 CFAP97Q9P2B7 532 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 STAP2Q9UGK3 403 aa5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 FEZ2Q9UHY8 353 aaPredicted RBP5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 ARHGEF17Q96PE2 2063 aaPredicted RBP5.83□□□□□ -1.48
RNU4-28P-201ENST00000364739 MGST3O14880 152 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 ARIH2O95376 493 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 ANXA1P04083 346 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 RARBP10826 455 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 TYRP1P17643 537 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 VCAM1P19320 739 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 CXCR5P32302 372 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 ANXA11P50995 505 aaKnown RBP5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 PIGFQ07326 219 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 BOP1Q14137 746 aaKnown RBP5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 TAF2Q6P1X5 1199 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 TMPRSS9Q7Z410 1059 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 USP37Q86T82 979 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 COL23A1Q86Y22 540 aaPredicted RBP5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 LNX2Q8N448 690 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 CAMKK1Q8N5S9 505 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 TOR1AIP2Q8NFQ8 470 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 DIS3LQ8TF46 1054 aaKnown RBP5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 CDH19Q9H159 772 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 RIOX1Q9H6W3 641 aa5.82□□□□□ -1.48
RNU4-28P-201ENST00000364739 GPR35Q9HC97 309 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms