RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 RPA1P27694 616 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 TAF6P49848 677 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 KDSRQ06136 332 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 MDH1BQ5I0G3 518 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 C16orf87Q6PH81 154 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 TRAPPC11Q7Z392 1133 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 HS6ST3Q8IZP7 471 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 NUP93Q8N1F7 819 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 PRMT1Q99873 361 aaKnown RBP18.87■□□□□ 0.61
COL18A1-202ENST00000355480 TARS2Q9BW92 718 aaKnown RBP18.87■□□□□ 0.61
COL18A1-202ENST00000355480 SERPINB9P50453 376 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 RPS6P62753 249 aaKnown RBP18.87■□□□□ 0.61
COL18A1-202ENST00000355480 ARHGAP15Q53QZ3 475 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 SPATA18Q8TC71 538 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 FAM118BQ9BPY3 351 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 PCMTD2Q9NV79 361 aa18.87■□□□□ 0.61
COL18A1-202ENST00000355480 ABI2Q9NYB9 513 aaPredicted RBP18.87■□□□□ 0.61
COL18A1-202ENST00000355480 LRG1P02750 347 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 FAM200BP0CF97 657 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 ZNF200P98182 395 aaPredicted RBP18.86■□□□□ 0.61
COL18A1-202ENST00000355480 HIC1Q14526 733 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 SMTNL2Q2TAL5 461 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 RARS2Q5T160 578 aaKnown RBP18.86■□□□□ 0.61
COL18A1-202ENST00000355480 C9orf72Q96LT7 481 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 ANKEF1Q9NU02 776 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 TMEM161AQ9NX61 479 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 SMG5Q9UPR3 1016 aaKnown RBP18.86■□□□□ 0.61
COL18A1-202ENST00000355480 TCP11X1B4DZS4 312 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 ALDH7A1P49419 539 aaKnown RBP18.86■□□□□ 0.61
COL18A1-202ENST00000355480 E2F4Q16254 413 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 CALML6Q8TD86 181 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 RSAD1Q9HA92 442 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 METTL5Q9NRN9 209 aaKnown RBP18.86■□□□□ 0.61
COL18A1-202ENST00000355480 PAK5Q9P286 719 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 CHMP2BQ9UQN3 213 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 ENO1P06733 434 aaKnown RBP18.86■□□□□ 0.61
COL18A1-202ENST00000355480 RGS4P49798 205 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 SNRPFP62306 86 aaKnown RBP18.86■□□□□ 0.61
COL18A1-202ENST00000355480 NAB2Q15742 525 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 ATMINO43313 823 aaPredicted RBP18.86■□□□□ 0.61
COL18A1-202ENST00000355480 THPOP40225 353 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 STX3Q13277 289 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 LONRF1Q17RB8 773 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 ZDHHC9Q9Y397 364 aa18.86■□□□□ 0.61
COL18A1-202ENST00000355480 ITGB3P05106 788 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 PNPLA4P41247 253 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 ITPK1Q13572 414 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 LRRC7Q96NW7 1537 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 USP42Q9H9J4 1324 aaKnown RBP18.85■□□□□ 0.61
COL18A1-202ENST00000355480 BRD2P25440 801 aaKnown RBP18.85■□□□□ 0.61
COL18A1-202ENST00000355480 INPP5AQ14642 412 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 TDRD10Q5VZ19 366 aaKnown RBP18.85■□□□□ 0.61
COL18A1-202ENST00000355480 AGBL3Q8NEM8 1001 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 OSBPL8Q9BZF1 889 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 PSMC3IPQ9P2W1 217 aaPredicted RBP18.85■□□□□ 0.61
COL18A1-202ENST00000355480 CNTNAP5Q8WYK1 1306 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 AGTP01019 485 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 CCDC85BQ15834 202 aaPredicted RBP18.85■□□□□ 0.61
COL18A1-202ENST00000355480 SPATA21Q7Z572 469 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 CDR2LQ86X02 465 aaPredicted RBP18.85■□□□□ 0.61
COL18A1-202ENST00000355480 GPRASP2Q96D09 838 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 FAM32AQ9Y421 112 aaKnown RBP18.85■□□□□ 0.61
COL18A1-202ENST00000355480 C1orf167Q5SNV9 1468 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 E2F8A0AVK6 867 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 ZRANB3Q5FWF4 1079 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 ZKSCAN4Q969J2 545 aaPredicted RBP18.85■□□□□ 0.61
COL18A1-202ENST00000355480 KLK14Q9P0G3 267 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 GPR75-ASB3A0A0A6YYF3 556 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 MYL2P10916 166 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 PGM1P36871 562 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 STX19Q8N4C7 294 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 TSC22D3Q99576 134 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 APOL5Q9BWW9 433 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 CLTCL1P53675 1640 aa18.85■□□□□ 0.61
COL18A1-202ENST00000355480 COMTP21964 271 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 SPRP35270 261 aaPredicted RBP18.84■□□□□ 0.61
COL18A1-202ENST00000355480 GUCY1A3Q02108 690 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 MTFR1Q15390 333 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 CYP4A22Q5TCH4 519 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 GRAMD4Q6IC98 578 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 NSMCE4AQ9NXX6 385 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 POLBP06746 335 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 ODC1P11926 461 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 GTF2A2P52657 109 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 HDAC4P56524 1084 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 DMC1Q14565 340 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 TERF2Q15554 542 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 EPC2Q52LR7 807 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 C4orf33Q8N1A6 199 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 TMA16Q96EY4 203 aaKnown RBP18.84■□□□□ 0.61
COL18A1-202ENST00000355480 L3MBTL3Q96JM7 780 aaPredicted RBP18.84■□□□□ 0.61
COL18A1-202ENST00000355480 ARHGAP26Q9UNA1 814 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 ITIH6Q6UXX5 1313 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 PJA2O43164 708 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 CST8O60676 142 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 MKRN4PQ13434 485 aaPredicted RBP18.84■□□□□ 0.61
COL18A1-202ENST00000355480 B4GALNT2Q8NHY0 566 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 AAASQ9NRG9 546 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 ANTXR2P58335 489 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 MAP3K10Q02779 954 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms