RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 APOL1O14791 398 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 ASNA1O43681 348 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 KRR1Q13601 381 aaKnown RBP12.66□□□□□ -0.38
COL12A1-202ENST00000345356 TLK2Q86UE8 772 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 PPIL6Q8IXY8 311 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 CENPTQ96BT3 561 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 FSD1LQ9BXM9 530 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 EXOSC4Q9NPD3 245 aaKnown RBP12.66□□□□□ -0.38
COL12A1-202ENST00000345356 CLIC5Q9NZA1 410 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
COL12A1-202ENST00000345356 UNC5CO95185 931 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 THRAP10827 490 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 ETS2P15036 469 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 CDH2P19022 906 aaPredicted RBP12.66□□□□□ -0.38
COL12A1-202ENST00000345356 BGNP21810 368 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 ABCE1P61221 599 aaKnown RBP12.66□□□□□ -0.38
COL12A1-202ENST00000345356 MARK2Q7KZI7 788 aaKnown RBP12.66□□□□□ -0.38
COL12A1-202ENST00000345356 PODNQ7Z5L7 613 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 LENG1Q96BZ8 264 aaPredicted RBP12.66□□□□□ -0.38
COL12A1-202ENST00000345356 TASP1Q9H6P5 420 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 UGGT1Q9NYU2 1555 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 ATP9BO43861 1147 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 RSBN1Q5VWQ0 802 aaPredicted RBP12.66□□□□□ -0.38
COL12A1-202ENST00000345356 TTI2Q6NXR4 508 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 MIS18BP1Q6P0N0 1132 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 PRUNE1Q86TP1 453 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 MROH7Q68CQ1 1323 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 DENND3A2RUS2 1198 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 SNAP23O00161 211 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 FCHO1O14526 889 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 GDF11O95390 407 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 DRD4P21917 467 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 PTENP60484 403 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 TRADDQ15628 312 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 IMPG1Q17R60 797 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 ZNF699Q32M78 642 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 ERMARDQ5T6L9 678 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 FRA10AC1Q70Z53 315 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 RMND5BQ96G75 393 aaPredicted RBP12.65□□□□□ -0.38
COL12A1-202ENST00000345356 PNMA3Q9UL41 463 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 RAG1P15918 1043 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 DEFB107AQ8IZN7 70 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 STKLD1Q8NE28 680 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 ADAMTS12P58397 1594 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 AP3B1O00203 1094 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 ENTPD5O75356 428 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 RAB14P61106 215 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 ARL13BQ3SXY8 428 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 FAM102AQ5T9C2 384 aaPredicted RBP12.65□□□□□ -0.38
COL12A1-202ENST00000345356 PCNX4Q63HM2 1172 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.65□□□□□ -0.38
COL12A1-202ENST00000345356 PLA2R1Q13018 1463 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 CFAP99D6REC4 459 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 M0QYV0 167 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 PGBD4Q96DM1 585 aa12.65□□□□□ -0.38
COL12A1-202ENST00000345356 DDX50Q9BQ39 737 aaKnown RBP12.65□□□□□ -0.38
COL12A1-202ENST00000345356 MYBP10242 640 aa12.65□□□□□ -0.39
COL12A1-202ENST00000345356 PSMA4P25789 261 aaKnown RBP12.65□□□□□ -0.39
COL12A1-202ENST00000345356 RWDD4Q6NW29 188 aaKnown RBP12.65□□□□□ -0.39
COL12A1-202ENST00000345356 ZBTB49Q6ZSB9 765 aa12.65□□□□□ -0.39
COL12A1-202ENST00000345356 FAM43BQ6ZT52 329 aaPredicted RBP12.65□□□□□ -0.39
COL12A1-202ENST00000345356 ARHGAP27Q6ZUM4 889 aa12.65□□□□□ -0.39
COL12A1-202ENST00000345356 SLC44A5Q8NCS7 719 aa12.65□□□□□ -0.39
COL12A1-202ENST00000345356 ARHGEF1Q92888 912 aaKnown RBP12.65□□□□□ -0.39
COL12A1-202ENST00000345356 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.65□□□□□ -0.39
COL12A1-202ENST00000345356 GPR101Q96P66 508 aaPredicted RBP12.65□□□□□ -0.39
COL12A1-202ENST00000345356 DHX35Q9H5Z1 703 aaKnown RBP12.65□□□□□ -0.39
COL12A1-202ENST00000345356 DCP1AQ9NPI6 582 aaPredicted RBP12.65□□□□□ -0.39
COL12A1-202ENST00000345356 SAR1AQ9NR31 198 aa12.65□□□□□ -0.39
COL12A1-202ENST00000345356 CAPN1P07384 714 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 KCNA2P16389 499 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 MCL1Q07820 350 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 EIF2AK1Q9BQI3 630 aaKnown RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 OLA1Q9NTK5 396 aaKnown RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 CFAP65Q6ZU64 1925 aaKnown RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 LINC00854A0A1B0GVQ3 168 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 MEI4A8MW99 385 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 LZTS3O60299 673 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 MAPK11Q15759 364 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 TCHHL1Q5QJ38 904 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 ZCCHC7Q8N3Z6 543 aaKnown RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 KAT2BQ92831 832 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 RPF1Q9H9Y2 349 aaKnown RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 SMAPO00193 183 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 MFN2O95140 757 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 TNFRSF8P28908 595 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 NPEPPSP55786 919 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 HACE1Q8IYU2 909 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 MAGEC3Q8TD91 643 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 SH3RF3Q8TEJ3 882 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 GCNAQ96QF7 691 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 REEP2Q9BRK0 252 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 EFCAB1Q9HAE3 211 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 MRGBPQ9NV56 204 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 STMN3Q9NZ72 180 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 DNALI1O14645 258 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 LCA5LO95447 670 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 GCLCP48506 637 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms