RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 LIG4P49917 911 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 BACE1P56817 501 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 MTM1Q13496 603 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 SGSM1Q2NKQ1 1148 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 DCAF12L1Q5VU92 463 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 PCNX4Q63HM2 1172 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 GADL1Q6ZQY3 521 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 CAPN12Q6ZSI9 719 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 ZNF280CQ8ND82 737 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 NLGN2Q8NFZ4 835 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 RFFLQ8WZ73 363 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 CLIP3Q96DZ5 547 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 KREMEN1Q96MU8 473 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 FNBP1Q96RU3 617 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 RAB17Q9H0T7 212 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 POLR3FQ9H1D9 316 aaPredicted RBP12.85□□□□□ -0.35
TMEM220-201ENST00000341871 SUCLA2Q9P2R7 463 aaPredicted RBP12.85□□□□□ -0.35
TMEM220-201ENST00000341871 UBIAD1Q9Y5Z9 338 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 ZNF541Q9H0D2 1346 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 LRRC37AA6NMS7 1700 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 NVLO15381 856 aaKnown RBP12.85□□□□□ -0.35
TMEM220-201ENST00000341871 PGK2P07205 417 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 GSTA2P09210 222 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 SRGAP2CP0DJJ0 459 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 PRLRP16471 622 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 PTDSS1P48651 473 aaKnown RBP12.85□□□□□ -0.35
TMEM220-201ENST00000341871 ZNF131P52739 623 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 CNPY1Q3B7I2 92 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 UBAP2Q5T6F2 1119 aaKnown RBP12.85□□□□□ -0.35
TMEM220-201ENST00000341871 FOXB2Q5VYV0 432 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 SCUBE1Q8IWY4 988 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 DNAJC1Q96KC8 554 aaKnown RBP12.85□□□□□ -0.35
TMEM220-201ENST00000341871 TMEM206Q9H813 350 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 METTL5Q9NRN9 209 aaKnown RBP12.85□□□□□ -0.35
TMEM220-201ENST00000341871 RABL2AQ9UBK7 228 aaPredicted RBP12.85□□□□□ -0.35
TMEM220-201ENST00000341871 SEL1LQ9UBV2 794 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
TMEM220-201ENST00000341871 GJB1P08034 283 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 CALB2P22676 271 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 WNT7BP56706 349 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 SEPT7Q16181 437 aaKnown RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 SCARA5Q6ZMJ2 495 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 VSIG1Q86XK7 387 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 ZC3H3Q8IXZ2 948 aaKnown RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 C1orf54Q8WWF1 131 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 SLC35B4Q969S0 331 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 ACSF2Q96CM8 615 aaPredicted RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 NUP85Q9BW27 656 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 JPH1Q9HDC5 661 aaPredicted RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 TBC1D22BQ9NU19 505 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 INTS9Q9NV88 658 aaKnown RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 SLC12A6Q9UHW9 1150 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 PNMA2Q9UL42 364 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 TMEM221A6NGB7 291 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 BOLA2-SMG1P6H3BVE0 249 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 ABLIM1O14639 778 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 MAGEB3O15480 346 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 RARAP10276 462 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 CHN1P15882 459 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 PTPRAP18433 802 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 SP2Q02086 613 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 C1orf220Q5T0J3 134 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 TMEM53Q6P2H8 277 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 SV2AQ7L0J3 742 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 ZNF554Q86TJ5 538 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 PRUNE1Q86TP1 453 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 CCDC105Q8IYK2 499 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 PRMT1Q99873 361 aaKnown RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 ADAM33Q9BZ11 813 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 KIAA1683Q9H0B3 1180 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 CFHP08603 1231 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 CCDC166P0CW27 439 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 CCND2P30279 289 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 HSD17B3P37058 310 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 ADARP55265 1226 aaKnown RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 OXCT1P55809 520 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 ACTR2P61160 394 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 ORC1Q13415 861 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 OR52E8Q6IFG1 317 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 LRRC71Q8N4P6 559 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 PDCD7Q8N8D1 485 aaKnown RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 TMEM161BQ8NDZ6 487 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 MRRFQ96E11 262 aaKnown RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 RAB3IPQ96QF0 476 aaPredicted RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 TARS2Q9BW92 718 aaKnown RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 DMAC2Q9NW81 257 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 UTP11Q9Y3A2 253 aaKnown RBP12.84□□□□□ -0.35
TMEM220-201ENST00000341871 LRRC42Q9Y546 428 aa12.84□□□□□ -0.35
TMEM220-201ENST00000341871 MAGEA13PA6NCF6 341 aa12.83□□□□□ -0.36
TMEM220-201ENST00000341871 TMEM247A6NEH6 219 aa12.83□□□□□ -0.36
TMEM220-201ENST00000341871 PDLIM1O00151 329 aa12.83□□□□□ -0.36
TMEM220-201ENST00000341871 OPHN1O60890 802 aa12.83□□□□□ -0.36
TMEM220-201ENST00000341871 RGS20O76081 388 aa12.83□□□□□ -0.36
TMEM220-201ENST00000341871 PENKP01210 267 aaPredicted RBP12.83□□□□□ -0.36
TMEM220-201ENST00000341871 PRKCIP41743 596 aa12.83□□□□□ -0.36
TMEM220-201ENST00000341871 GALK1P51570 392 aa12.83□□□□□ -0.36
TMEM220-201ENST00000341871 COG7P83436 770 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms