RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 FNDC8Q8TC99 324 aa5.93□□□□□ -1.46
CSDE1-202ENST00000339438 GRAMD1AQ96CP6 724 aa5.93□□□□□ -1.46
CSDE1-202ENST00000339438 CATSPER2Q96P56 530 aa5.93□□□□□ -1.46
CSDE1-202ENST00000339438 HNRNPABQ99729 332 aaKnown RBP5.93□□□□□ -1.46
CSDE1-202ENST00000339438 ROPN1BQ9BZX4 212 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-202ENST00000339438 RIOX1Q9H6W3 641 aa5.93□□□□□ -1.46
CSDE1-202ENST00000339438 ROPN1Q9HAT0 212 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-202ENST00000339438 MTMR4Q9NYA4 1195 aa5.93□□□□□ -1.46
CSDE1-202ENST00000339438 UTP11Q9Y3A2 253 aaKnown RBP5.93□□□□□ -1.46
CSDE1-202ENST00000339438 TLDC2A0PJX2 215 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 E9PBE3 544 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 CETN3O15182 167 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 BIRC5O15392 142 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 NMT2O60551 498 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 HARSP12081 509 aaKnown RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 RARGP13631 454 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 AMPD1P23109 780 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ADCY1Q08828 1119 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 PPP2R5CQ13362 524 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 LONRF1Q17RB8 773 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ZCWPW2Q504Y3 356 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 RHBDF2Q6PJF5 856 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ELMSAN1Q6PJG2 1045 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 UGT2A3Q6UWM9 527 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 MFSD6Q6ZSS7 791 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 TMEM110Q86TL2 294 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 BBS5Q8N3I7 341 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 JDP2Q8WYK2 163 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 SNX27Q96L92 541 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ECSITQ9BQ95 431 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 PYM1Q9BRP8 204 aaKnown RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 SENP6Q9GZR1 1112 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 EBF3Q9H4W6 596 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 KLHL14Q9P2G3 628 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 MAGEC2Q9UBF1 373 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ADAMTS1Q9UHI8 967 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 RASGRF2O14827 1237 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ATMINO43313 823 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 EXOC3O60645 756 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 STBD1O95210 358 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 PYGMP11217 842 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 CHRNB2P17787 502 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 VCAM1P19320 739 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 GCAP28676 217 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 MLH1P40692 756 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 MTIF2P46199 727 aaKnown RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 VPS41P49754 854 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 GALK1P51570 392 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ARFIP2P53365 341 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ADARP55265 1226 aaKnown RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 SESN3P58005 492 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 PTK2Q05397 1052 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 CDC16Q13042 620 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 MAPK7Q13164 816 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 HIC1Q14526 733 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 PTPROQ16827 1216 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 TMEM259Q4ZIN3 620 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 TAF1BQ53T94 588 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 OLFML2BQ68BL8 750 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 SEPT14Q6ZU15 432 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ACAD11Q709F0 780 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ZNF365Q70YC5 407 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 CLNKQ7Z7G1 428 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ZNF467Q7Z7K2 595 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 DAAM2Q86T65 1068 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 CCDC84Q86UT8 332 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 JAMLQ86YT9 394 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ABRAQ8N0Z2 381 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 GDAP1Q8TB36 358 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 MGARPQ8TDB4 240 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ACER1Q8TDN7 264 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ZNF296Q8WUU4 475 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ARHGEF2Q92974 986 aaKnown RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 PRR11Q96HE9 360 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 C7orf25Q9BPX7 421 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 GPCPD1Q9NPB8 672 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 LGALS13Q9UHV8 139 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 TMED5Q9Y3A6 229 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 SMIM23A6NLE4 172 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ADAM23O75077 832 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ZNF865P0CJ78 1059 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 CYBAP13498 195 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 CDK8P49336 464 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 HSD17B4P51659 736 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 DR1Q01658 176 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 CAMK2BQ13554 666 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ADRM1Q16186 407 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 EXOC3L4Q17RC7 722 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 NEPROQ6NW34 567 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 FBXL19Q6PCT2 694 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 CCDC80Q76M96 950 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 OTUD6AQ7L8S5 288 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 PDSS2Q86YH6 399 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 SRBD1Q8N5C6 995 aaKnown RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ERMNQ8TAM6 284 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 SERPINB12Q96P63 405 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 LRRC37BQ96QE4 947 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 NAP1L3Q99457 506 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 TRIM31Q9BZY9 425 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 CCSER1Q9C0I3 900 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms