RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 MBOAT7Q96N66 472 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 NACC1Q96RE7 527 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 MAK16Q9BXY0 300 aaKnown RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 CADM1Q9BY67 442 aaKnown RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 VCXQ9H320 206 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 STOML1Q9UBI4 398 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 LIN7AO14910 233 aaPredicted RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 AHCYL1O43865 530 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 WFS1O76024 890 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 CYP1A2P05177 515 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 PRELPP51888 382 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 TAS2R40P59535 323 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 GAD2Q05329 585 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 PDIA2Q13087 525 aaKnown RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 MOGSQ13724 837 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 ZNF568Q3ZCX4 644 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 TTC7BQ86TV6 843 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.33□□□□□ -1.08
VMA21-201ENST00000330374 FAM71AQ8IYT1 594 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 CCDC89Q8N998 374 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 CFAP57Q96MR6 1250 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 OSBPL8Q9BZF1 889 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 CDHR5Q9HBB8 845 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 WASF2Q9Y6W5 498 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 ATP8B3O60423 1300 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 DDTLA6NHG4 134 aaPredicted RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 FESP07332 822 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 PRKAR2AP13861 404 aaKnown RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 PTPN4P29074 926 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 HADHBP55084 474 aaKnown RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 ACVR2BQ13705 512 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 THOC5Q13769 683 aaKnown RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 ACSBG2Q5FVE4 666 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 C1orf220Q5T0J3 134 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 CWF19L1Q69YN2 538 aaKnown RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 C12orf50Q8NA57 414 aaPredicted RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 WDR60Q8WVS4 1066 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 NRG4Q8WWG1 115 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 POMGNT1Q8WZA1 660 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 FGD4Q96M96 766 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 DCLRE1BQ9H816 532 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 UVRAGQ9P2Y5 699 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 CCNL1Q9UK58 526 aaPredicted RBP8.33□□□□□ -1.08
VMA21-201ENST00000330374 DNPEPQ9ULA0 475 aa8.33□□□□□ -1.08
VMA21-201ENST00000330374 HAUS5O94927 633 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 TROVE2P10155 538 aaKnown RBP eCLIP8.32□□□□□ -1.08
VMA21-201ENST00000330374 GZMAP12544 262 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 SERPINB3P29508 390 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 SSTR1P30872 391 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 VHLP40337 213 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 SOX10P56693 466 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 CCDC15Q0P6D6 951 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 LRRC36Q1X8D7 754 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 C4orf50Q6ZRC1 276 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 CLNKQ7Z7G1 428 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 TTC17Q96AE7 1141 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 SAE1Q9UBE0 346 aaPredicted RBP8.32□□□□□ -1.08
VMA21-201ENST00000330374 GAKO14976 1311 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 SORBS3O60504 671 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 RPS6KA4O75676 772 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 FOSP01100 380 aaPredicted RBP8.32□□□□□ -1.08
VMA21-201ENST00000330374 CFHP08603 1231 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 TCF4P15884 667 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 GCAP28676 217 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 CCNG1P51959 295 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 CACNA2D1P54289 1103 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 PDK4Q16654 411 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 TMEM164Q5U3C3 297 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 ACAD10Q6JQN1 1059 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 ISLR2Q6UXK2 745 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 FAM43BQ6ZT52 329 aaPredicted RBP8.32□□□□□ -1.08
VMA21-201ENST00000330374 SLC25A41Q8N5S1 370 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 FBXO22Q8NEZ5 403 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 CRYGNQ8WXF5 182 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 INPP5DQ92835 1189 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 FAM161BQ96MY7 647 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 NT5C1BQ96P26 610 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 MPHOSPH6Q99547 160 aaKnown RBP8.32□□□□□ -1.08
VMA21-201ENST00000330374 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.32□□□□□ -1.08
VMA21-201ENST00000330374 LARSQ9P2J5 1176 aaKnown RBP8.32□□□□□ -1.08
VMA21-201ENST00000330374 SLC17A7Q9P2U7 560 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 LGALS13Q9UHV8 139 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 FAM102BQ5T8I3 360 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 RASIP1Q5U651 963 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 PPFIBP2Q8ND30 876 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 FBXO41Q8TF61 875 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 KIFAP3Q92845 792 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 ZNF333Q96JL9 665 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 GBP5Q96PP8 586 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 TTC1Q99614 292 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 FARP1Q9Y4F1 1045 aaPredicted RBP8.32□□□□□ -1.08
VMA21-201ENST00000330374 MROH7Q68CQ1 1323 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 IGLV3-22A0A075B6J6 115 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 SGK1O00141 431 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 TBX10O75333 385 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 ESRRAP11474 423 aaPredicted RBP8.32□□□□□ -1.08
VMA21-201ENST00000330374 IL1R1P14778 569 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 ETS2P15036 469 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 NSFP46459 744 aaKnown RBP8.32□□□□□ -1.08
VMA21-201ENST00000330374 MTMR2Q13614 643 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms