RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 VTA1Q9NP79 307 aa15.84■□□□□ 0.13
CHFR-202ENST00000315585 DDX20Q9UHI6 824 aaKnown RBP15.84■□□□□ 0.13
CHFR-202ENST00000315585 TCRBV7S2A1N4TA0A589 114 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 ASAP2O43150 1006 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 MAFO75444 373 aaPredicted RBP15.83■□□□□ 0.12
CHFR-202ENST00000315585 CALB1P05937 261 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 CLTAP09496 248 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 GLRA2P23416 452 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 KCNJ1P48048 391 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 ACOT2P49753 483 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 NLRP11P59045 1033 aaKnown RBP15.83■□□□□ 0.12
CHFR-202ENST00000315585 PLEKHA7Q6IQ23 1121 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 TMEM270Q6UE05 265 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 ARMCX2Q7L311 632 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 FBXO16Q8IX29 292 aaPredicted RBP15.83■□□□□ 0.12
CHFR-202ENST00000315585 C1orf54Q8WWF1 131 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 BRI3BPQ8WY22 251 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 DDX27Q96GQ7 796 aaKnown RBP15.83■□□□□ 0.12
CHFR-202ENST00000315585 RBM41Q96IZ5 413 aaKnown RBP15.83■□□□□ 0.12
CHFR-202ENST00000315585 SEC16BQ96JE7 1060 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 DCLK3Q9C098 648 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 ZNF518BQ9C0D4 1074 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 TMEM51Q9NW97 253 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 FAM170AA1A519 330 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 ARIH2O95376 493 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 LSM8O95777 96 aaKnown RBP15.83■□□□□ 0.12
CHFR-202ENST00000315585 ACO1P21399 889 aaKnown RBP15.83■□□□□ 0.12
CHFR-202ENST00000315585 ADCY8P40145 1251 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 NOMO3P69849 1222 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 NOP14P78316 857 aaKnown RBP15.83■□□□□ 0.12
CHFR-202ENST00000315585 ZNF792Q3KQV3 632 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 IER5Q5VY09 327 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 CCDC25Q86WR0 208 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 TMEM143Q96AN5 459 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 CCDC114Q96M63 670 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 R3HDMLQ9H3Y0 253 aa15.83■□□□□ 0.12
CHFR-202ENST00000315585 ADCY3O60266 1144 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 CHN1P15882 459 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 FGFR4P22455 802 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 ADORA2AP29274 412 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 LAMC2Q13753 1193 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 TNFAIP8L3Q5GJ75 292 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 WDR49Q8IV35 697 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 RCOR2Q8IZ40 523 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 RBBP8NLQ8NC74 664 aaPredicted RBP15.82■□□□□ 0.12
CHFR-202ENST00000315585 FEZF2Q8TBJ5 459 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 SAMD15Q9P1V8 674 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 ANAPC5Q9UJX4 755 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 CEP83Q9Y592 693 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 CAPN7Q9Y6W3 813 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 TLR3O15455 904 aaKnown RBP15.82■□□□□ 0.12
CHFR-202ENST00000315585 TCEA3O75764 348 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 TTC4O95801 387 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 COPS2P61201 443 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 YWHAEP62258 255 aaKnown RBP15.82■□□□□ 0.12
CHFR-202ENST00000315585 MAMLD1Q13495 774 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 NCOA4Q13772 614 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 LRRC38Q5VT99 294 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 CRELD2Q6UXH1 353 aaPredicted RBP15.82■□□□□ 0.12
CHFR-202ENST00000315585 PACS2Q86VP3 889 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 RELL1Q8IUW5 271 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 IPO4Q8TEX9 1081 aaKnown RBP15.82■□□□□ 0.12
CHFR-202ENST00000315585 MRPL4Q9BYD3 311 aaKnown RBP15.82■□□□□ 0.12
CHFR-202ENST00000315585 SLC5A4Q9NY91 659 aa15.82■□□□□ 0.12
CHFR-202ENST00000315585 ZNFX1Q9P2E3 1918 aaKnown RBP15.81■□□□□ 0.12
CHFR-202ENST00000315585 DCDC2CA8MYV0 355 aa15.81■□□□□ 0.12
CHFR-202ENST00000315585 MCL1Q07820 350 aa15.81■□□□□ 0.12
CHFR-202ENST00000315585 ACTN3Q08043 901 aaPredicted RBP15.81■□□□□ 0.12
CHFR-202ENST00000315585 MXD4Q14582 209 aaPredicted RBP15.81■□□□□ 0.12
CHFR-202ENST00000315585 RHBDF2Q6PJF5 856 aa15.81■□□□□ 0.12
CHFR-202ENST00000315585 MMS22LQ6ZRQ5 1243 aa15.81■□□□□ 0.12
CHFR-202ENST00000315585 CCDC197Q8NCU1 140 aa15.81■□□□□ 0.12
CHFR-202ENST00000315585 ASAP3Q8TDY4 903 aa15.81■□□□□ 0.12
CHFR-202ENST00000315585 C11orf70Q9BRQ4 267 aa15.81■□□□□ 0.12
CHFR-202ENST00000315585 TARS2Q9BW92 718 aaKnown RBP15.81■□□□□ 0.12
CHFR-202ENST00000315585 OSBPL8Q9BZF1 889 aa15.81■□□□□ 0.12
CHFR-202ENST00000315585 CDC42EP4Q9H3Q1 356 aaKnown RBP15.81■□□□□ 0.12
CHFR-202ENST00000315585 ANKFY1Q9P2R3 1169 aa15.81■□□□□ 0.12
CHFR-202ENST00000315585 HBP1O60381 514 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 TJP3O95049 919 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 VNN1O95497 513 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 RDXP35241 583 aaKnown RBP15.8■□□□□ 0.12
CHFR-202ENST00000315585 MKRN3Q13064 507 aaKnown RBP15.8■□□□□ 0.12
CHFR-202ENST00000315585 SNX1Q13596 522 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 AUHQ13825 339 aaKnown RBP15.8■□□□□ 0.12
CHFR-202ENST00000315585 FAM110CQ1W6H9 321 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 HSDL1Q3SXM5 330 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 ZBTB8OSQ8IWT0 167 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 C2orf40Q9H1Z8 148 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 KDM4CQ9H3R0 1056 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 ADGRA2Q96PE1 1338 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 TOM1L1O75674 476 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 GH1P01241 217 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 GHRP10912 638 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 RALAP11233 206 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 KLF1Q13351 362 aaPredicted RBP15.8■□□□□ 0.12
CHFR-202ENST00000315585 ITIH4Q14624 930 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 SGSM1Q2NKQ1 1148 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 ZNF568Q3ZCX4 644 aa15.8■□□□□ 0.12
CHFR-202ENST00000315585 DRICH1Q6PGQ1 229 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms