RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 MIIPQ5JXC2 388 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 CCDC117Q8IWD4 279 aaPredicted RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 IQCF2Q8IXL9 164 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 VPS37AQ8NEZ2 397 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 KIF12Q96FN5 646 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 TARS2Q9BW92 718 aaKnown RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 TRPV6Q9H1D0 765 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 MTIF3Q9H2K0 278 aaKnown RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 INTS13Q9NVM9 706 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 RRN3Q9NYV6 651 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 MKL2Q9ULH7 1088 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 UMODL1Q5DID0 1318 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 PHIPQ8WWQ0 1821 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 GSTTP1A0A1W2PQM5 241 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 KRIT1O00522 736 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 KCNK3O14649 394 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 B4GALT4O60513 344 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 LCA5LO95447 670 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 TAF6P49848 677 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 VASPP50552 380 aaPredicted RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 C1QBPQ07021 282 aaKnown RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 USP4Q13107 963 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 DYNC1I2Q13409 638 aaKnown RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 LY6KQ17RY6 165 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 ARL13BQ3SXY8 428 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 ACAD10Q6JQN1 1059 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 DPH6Q7L8W6 267 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 PCGF5Q86SE9 256 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 TTC30AQ86WT1 665 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 SPATS2Q86XZ4 545 aaKnown RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 RHOT1Q8IXI2 618 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 ARHGAP18Q8N392 663 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 LRRC52Q8N7C0 313 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 MED15Q96RN5 788 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 VCXQ9H320 206 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 VCX3BQ9H321 246 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 VCX3AQ9NNX9 186 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 PFDN4Q9NQP4 134 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 STAP1Q9ULZ2 295 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 USH1CQ9Y6N9 552 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 TRIM49P0CI25 452 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 TRIM49CP0CI26 452 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 EPHB4P54760 987 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 PDE1CQ14123 709 aaPredicted RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 ZNF394Q53GI3 561 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 CDCA2Q69YH5 1023 aaPredicted RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 GPAT2Q6NUI2 795 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 EMBQ6PCB8 327 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 DSTYKQ6XUX3 929 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 GSTA5Q7RTV2 222 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 SIX5Q8N196 739 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 TMEM86AQ8N2M4 240 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 EIF1ADQ8N9N8 165 aaKnown RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 PPP1R14BQ96C90 147 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 ACO2Q99798 780 aaKnown RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 MED10Q9BTT4 135 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 NT5C1AQ9BXI3 368 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 L2HGDHQ9H9P8 463 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 ST7Q9NRC1 585 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 CNOT8Q9UFF9 292 aaKnown RBP6.35□□□□□ -1.39
SEC22A-201ENST00000309934 SLC12A6Q9UHW9 1150 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 STYXL1Q9Y6J8 313 aa6.35□□□□□ -1.39
SEC22A-201ENST00000309934 TMEM110-MUSTN1A8MSY1 372 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 SORBS3O60504 671 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 EFCAB14O75071 495 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 ATP9AO75110 1047 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 COQ9O75208 318 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 PPP1R37O75864 691 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 TJP3O95049 919 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 CHRNA3P32297 505 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 LHX1P48742 406 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 NLRP11P59045 1033 aaKnown RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 COPS2P61201 443 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 ILF2Q12905 390 aaKnown RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 NNTQ13423 1086 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 TMED1Q13445 227 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 SHROOM1Q2M3G4 852 aaPredicted RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 SPATA21Q7Z572 469 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 RBBP8NLQ8NC74 664 aaPredicted RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 APPL2Q8NEU8 664 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 P3H4Q92791 437 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 HPS3Q969F9 1004 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 HEXIM2Q96MH2 286 aaKnown RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 MRPL9Q9BYD2 267 aaKnown RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 RABEP2Q9H5N1 569 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 PPCSQ9HAB8 311 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 HMX1Q9NP08 348 aaPredicted RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 CYLDQ9NQC7 956 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 SAGE1Q9NXZ1 904 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 PIN4Q9Y237 131 aaKnown RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 COQ4Q9Y3A0 265 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 FHOD1Q9Y613 1164 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 hCG_2014768A0A024R1R8 64 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 A0A0B4J269 797 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 AP3B1O00203 1094 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 NDUFAB1O14561 156 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 SEPT4O43236 478 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 TGFB1I1O43294 461 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 PSTPIP1O43586 416 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 FBXO21O94952 628 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms