RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 L1RE1Q9UN81 338 aa23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 NME7Q9Y5B8 376 aa23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 CHD7Q9P2D1 2997 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 M0QZQ0 153 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 CYB561D2O14569 222 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 TADA2AO75478 443 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 MFAP3P55082 362 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 TNNC1P63316 161 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 MLLT1Q03111 559 aaPredicted RBP23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 COLGALT1Q8NBJ5 622 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 SHC3Q92529 594 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 IGSF21Q96ID5 467 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 MRPL45Q9BRJ2 306 aaKnown RBP23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 COLEC11Q9BWP8 271 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 EDEM3Q9BZQ6 932 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 TIMM13Q9Y5L4 95 aaPredicted RBP23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 CHD9Q3L8U1 2897 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 RFX1P22670 979 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 TBXAS1P24557 533 aaPredicted RBP23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 PBX2P40425 430 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 ARID5BQ14865 1188 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 E4F1Q66K89 784 aaPredicted RBP23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 CACNA2D4Q7Z3S7 1137 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 SLC39A11Q8N1S5 342 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 KBTBD7Q8WVZ9 684 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 ANP32BQ92688 251 aaKnown RBP23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 SUSD3Q96L08 255 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 VN1R3Q9BXE9 311 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 CISHQ9NSE2 258 aa23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 LUC7L2Q9Y383 392 aaKnown RBP23.35■■□□□ 1.33
PDLIM3-203ENST00000284771 VWA8A3KMH1 1905 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 LINC01553A4QN01 128 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 LRRC53A6NM62 1247 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 F8VZ95 297 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 LAG3P18627 525 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 CD58P19256 250 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 WSCD1Q658N2 575 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 DSTYKQ6XUX3 929 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 PPFIBP1Q86W92 1011 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 GPIHBP1Q8IV16 184 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 TDHQ8IZJ6 230 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 PDCL2Q8N4E4 241 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 TC2NQ8N9U0 490 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 ZNF558Q96NG5 402 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 IMPACTQ9P2X3 320 aa23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 YBX2Q9Y2T7 364 aaKnown RBP23.34■■□□□ 1.33
PDLIM3-203ENST00000284771 HCRTO43612 131 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 P4HA1P13674 534 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 KRT9P35527 623 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 ZBED6P86452 979 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 TRIM14Q14142 442 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 CHRDL2Q6WN34 429 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 ENOSF1Q7L5Y1 443 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 DPH6Q7L8W6 267 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 TAS1R1Q7RTX1 841 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 TOP6BLQ8N6T0 577 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 APPL2Q8NEU8 664 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 WHAMMQ8TF30 809 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 IQCDQ96DY2 449 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 CYP3A43Q9HB55 503 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 HMGXB4Q9UGU5 601 aa23.33■■□□□ 1.33
PDLIM3-203ENST00000284771 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 HUS1O60921 280 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 MFAP3LO75121 409 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 TACC1O75410 805 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 CA3P07451 260 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 FUT10Q6P4F1 479 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 PDXDC1Q6P996 788 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 JAKMIP2Q96AA8 810 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 B3GALT6Q96L58 329 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 SPAG5Q96R06 1193 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 TWNKQ96RR1 684 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 PBX4Q9BYU1 374 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 CNTN6Q9UQ52 1028 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 DAAM1Q9Y4D1 1078 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 PAX3P23760 479 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 LMO2P25791 158 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 INCA1Q0VD86 236 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 OSTM1Q86WC4 334 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 FAM71AQ8IYT1 594 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 RNF168Q8IYW5 571 aaPredicted RBP23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 FAM81BQ96LP2 452 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 ACP6Q9NPH0 428 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 PCDHA11Q9Y5I1 949 aa23.32■■□□□ 1.32
PDLIM3-203ENST00000284771 TSC2P49815 1807 aa23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 NLRC5Q86WI3 1866 aa23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 AKR1B15C9JRZ8 316 aaPredicted RBP23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 GABRDO14764 452 aa23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 CILPO75339 1184 aa23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 CYP11A1P05108 521 aa23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 TKTP29401 623 aaKnown RBP23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 CLCN1P35523 988 aa23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 TMEM270Q6UE05 265 aa23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 CCDC186Q7Z3E2 898 aa23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 PPP1R9BQ96SB3 815 aa23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 DNAJC7Q99615 494 aa23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 C17orf80Q9BSJ5 609 aa23.31■■□□□ 1.32
PDLIM3-203ENST00000284771 CALCAP01258 141 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 SOX5P35711 763 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms