RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 SLC37A4O43826 429 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 HAUS5O94927 633 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 TDP2O95551 362 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 OR52Z1P0C646 297 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 GNA11P29992 359 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 LRRC63Q05C16 580 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 MED21Q13503 144 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 NCOA4Q13772 614 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 ITGA9Q13797 1035 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 SLC1A5Q15758 541 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 MYLK3Q32MK0 819 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 COBLL1Q53SF7 1204 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 C6orf183Q5T699 404 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 DPY19L2P1Q6NXN4 242 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 GJB7Q6PEY0 223 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 ARHGAP27Q6ZUM4 889 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 CCDC65Q8IXS2 484 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 FAM186BQ8IYM0 893 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 C4orf33Q8N1A6 199 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 ARHGEF26Q96DR7 871 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 EPB41L1Q9H4G0 881 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 ARMCX1Q9P291 453 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 HEY2Q9UBP5 337 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 TRAF3IP3Q9Y228 551 aa16.59■□□□□ 0.25
CTDSP1-201ENST00000273062 USP17L10C9JJH3 530 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 FBP2O00757 339 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 TTC4O95801 387 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 PDGFRBP09619 1106 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 MUTP22033 750 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 RPA3P35244 121 aaPredicted RBP16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 ZNF543Q08ER8 600 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 DACT2Q5SW24 774 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 THOC7Q6I9Y2 204 aaKnown RBP16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 CCDC105Q8IYK2 499 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 DENND1AQ8TEH3 1009 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 PPP1R10Q96QC0 940 aaKnown RBP16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 KLHL4Q9C0H6 718 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 TIMMDC1Q9NPL8 285 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 ARHGEF4Q9NR80 690 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 FAM198AQ9UFP1 575 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 PCYOX1Q9UHG3 505 aa16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 DDX25Q9UHL0 483 aaKnown RBP16.58■□□□□ 0.25
CTDSP1-201ENST00000273062 EIF3FO00303 357 aaPredicted RBP16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 ALAS1P13196 640 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 ATP6V1B1P15313 513 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 UCHL3P15374 230 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 CETN2P41208 172 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 HIRAP54198 1017 aaPredicted RBP16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 RELAQ04206 551 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 MTMR2Q13614 643 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 HNRNPDQ14103 355 aaKnown RBP16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 Q6ZNX1 250 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 UNC13DQ70J99 1090 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 PODNQ7Z5L7 613 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 NUP93Q8N1F7 819 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 ERLEC1Q96DZ1 483 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 NSL1Q96IY1 281 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 SNX27Q96L92 541 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 PARP2Q9UGN5 583 aa16.58■□□□□ 0.24
CTDSP1-201ENST00000273062 H0YIN7 160 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 TXNDC9O14530 226 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 TROVE2P10155 538 aaKnown RBP eCLIP16.57■□□□□ 0.243e-6■□□□□ 9.2
CTDSP1-201ENST00000273062 VCLP18206 1134 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 CHRNA3P32297 505 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 PPP1R2P41236 205 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 STT3AP46977 705 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 PPATQ06203 517 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 PDK3Q15120 406 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 PDK4Q16654 411 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 ANKDD1AQ495B1 522 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 ASPRV1Q53RT3 343 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 UGT2A3Q6UWM9 527 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 NLRX1Q86UT6 975 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 TRIM59Q8IWR1 403 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 OLIG1Q8TAK6 271 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 LNX1Q8TBB1 728 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 ZDHHC15Q96MV8 337 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 LIN28AQ9H9Z2 209 aaKnown RBP16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 COG5Q9UP83 839 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 SPO11Q9Y5K1 396 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 C15orf38-AP3S2A0A0A6YYH1 394 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 WDR91A4D1P6 747 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 E9PBE3 544 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 THAP12O43422 761 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 HLA-DOAP06340 250 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 PIM1P11309 404 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 PFKPQ01813 784 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 LPIN1Q14693 890 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 MAPK6Q16659 721 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 ZNF772Q68DY9 489 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 ARPINQ7Z6K5 226 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 PATL1Q86TB9 770 aaKnown RBP16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 BBS5Q8N3I7 341 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 MPHOSPH6Q99547 160 aaKnown RBP16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 HNRNPABQ99729 332 aaKnown RBP16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 BLOC1S4Q9NUP1 217 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 HESX1Q9UBX0 185 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 CHORDC1Q9UHD1 332 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 TELO2Q9Y4R8 837 aa16.57■□□□□ 0.24
CTDSP1-201ENST00000273062 PODXLO00592 558 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms