RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 AGAP11Q8TF27 550 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 TRIM6Q9C030 488 aaPredicted RBP21.83■■□□□ 1.09
SNX3-201ENST00000230085 ECT2Q9H8V3 914 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 AGO4Q9HCK5 861 aaKnown RBP21.83■■□□□ 1.09
SNX3-201ENST00000230085 GTF3C4Q9UKN8 822 aa21.83■■□□□ 1.09
SNX3-201ENST00000230085 DYNC1LI2O43237 492 aaPredicted RBP21.82■■□□□ 1.08
SNX3-201ENST00000230085 MSCO60682 206 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 ATP5HO75947 161 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 CLTAP09496 248 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 SCP2P22307 547 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 ACCSLQ4AC99 568 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 SPATA21Q7Z572 469 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 MYCT1Q8N699 235 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 ARHGEF2Q92974 986 aaKnown RBP21.82■■□□□ 1.08
SNX3-201ENST00000230085 ZNF577Q9BSK1 485 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 CDC42EP4Q9H3Q1 356 aaKnown RBP21.82■■□□□ 1.08
SNX3-201ENST00000230085 IPO5O00410 1097 aaKnown RBP21.82■■□□□ 1.08
SNX3-201ENST00000230085 EML1O00423 815 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 PSMD10O75832 226 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 PGK1P00558 417 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 FGFR4P22455 802 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 NMT1P30419 496 aaKnown RBP21.82■■□□□ 1.08
SNX3-201ENST00000230085 PTK6Q13882 451 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 PARP6Q2NL67 630 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 TLK2Q86UE8 772 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 RIBC1Q8N443 379 aaPredicted RBP21.82■■□□□ 1.08
SNX3-201ENST00000230085 PSPC1Q8WXF1 523 aaKnown RBP21.82■■□□□ 1.08
SNX3-201ENST00000230085 SLC5A5Q92911 643 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 MAGEB18Q96M61 343 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 SENP7Q9BQF6 1050 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 FOXP3Q9BZS1 431 aa21.82■■□□□ 1.08
SNX3-201ENST00000230085 NOCTQ9UK39 431 aaKnown RBP21.82■■□□□ 1.08
SNX3-201ENST00000230085 RPL26L1Q9UNX3 145 aaKnown RBP21.82■■□□□ 1.08
SNX3-201ENST00000230085 TMEM120BA0PK00 339 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 E7ENQ6 273 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 MAGEB2O15479 319 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 SLITRK3O94933 977 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 TTC4O95801 387 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 PYGMP11217 842 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 MARCKSL1P49006 195 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 CELF3Q5SZQ8 465 aaKnown RBP21.81■■□□□ 1.08
SNX3-201ENST00000230085 RGS9BPQ6ZS82 235 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 CEP128Q6ZU80 1094 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 FAM178BQ8IXR5 827 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 DHX37Q8IY37 1157 aaKnown RBP21.81■■□□□ 1.08
SNX3-201ENST00000230085 FAM71AQ8IYT1 594 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 XPNPEP3Q9NQH7 507 aa21.81■■□□□ 1.08
SNX3-201ENST00000230085 GJB1P08034 283 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 IVDP26440 423 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 RWDD2BP57060 319 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 KCNJ2P63252 427 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 ARHGAP1Q07960 439 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 MYO1EQ12965 1108 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 ZKSCAN8Q15776 578 aaPredicted RBP21.8■■□□□ 1.08
SNX3-201ENST00000230085 FAM133BQ5BKY9 247 aaKnown RBP21.8■■□□□ 1.08
SNX3-201ENST00000230085 CCDC105Q8IYK2 499 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 KLHL29Q96CT2 875 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 NACC1Q96RE7 527 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 TRIM7Q9C029 511 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 EURLQ9NYK6 297 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 TELO2Q9Y4R8 837 aa21.8■■□□□ 1.08
SNX3-201ENST00000230085 TCP11X1B4DZS4 312 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 DHX15O43143 795 aaKnown RBP21.79■■□□□ 1.08
SNX3-201ENST00000230085 FARP2O94887 1054 aaPredicted RBP21.79■■□□□ 1.08
SNX3-201ENST00000230085 GH1P01241 217 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 MYCNP04198 464 aaPredicted RBP21.79■■□□□ 1.08
SNX3-201ENST00000230085 B3GNT9Q6UX72 402 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 PPP1R21Q6ZMI0 780 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 ADAT2Q7Z6V5 191 aaKnown RBP21.79■■□□□ 1.08
SNX3-201ENST00000230085 BANK1Q8NDB2 785 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 OR6J1Q8NGC5 347 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 EPS8L1Q8TE68 723 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 ABHD8Q96I13 439 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 FGFR1OP2Q9NVK5 253 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 Q9Y3F1 56 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 MYADML2A6NDP7 307 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 ANKRD63C9JTQ0 380 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 LUC7L3O95232 432 aaKnown RBP21.79■■□□□ 1.08
SNX3-201ENST00000230085 SGPL1O95470 568 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 ABHD2P08910 425 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 C6orf222P0C671 652 aaPredicted RBP21.79■■□□□ 1.08
SNX3-201ENST00000230085 CHRNB2P17787 502 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 MSH2P43246 934 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 SP4Q02446 784 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 PTP4A2Q12974 167 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 HSDL1Q3SXM5 330 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 ARHGEF18Q6ZSZ5 1173 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 TNS4Q8IZW8 715 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 GRK7Q8WTQ7 553 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 SLC20A1Q8WUM9 679 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 SNF8Q96H20 258 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 TMEM237Q96Q45 408 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 TMEM106CQ9BVX2 250 aa21.79■■□□□ 1.08
SNX3-201ENST00000230085 DBR1Q9UK59 544 aaKnown RBP21.79■■□□□ 1.08
SNX3-201ENST00000230085 FRMPD3Q5JV73 1810 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 DDX39AO00148 427 aaKnown RBP21.78■■□□□ 1.08
SNX3-201ENST00000230085 PPP1R12AO14974 1030 aaPredicted RBP21.78■■□□□ 1.08
SNX3-201ENST00000230085 ADAMTS4O75173 837 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 GJA9P57773 515 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 IRX1P78414 480 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms