RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 RictorQ6QI06 1708 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 DselQ0VBN2 1207 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Parp6Q6P6P7 630 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Btbd10Q80X66 475 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ppp1r12bQ8BG95 976 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ccser1Q8C0C4 895 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Med21Q9CQ39 144 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 DmgdhQ9DBT9 869 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Kcnh7Q9ER47 1195 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Prl6a1O35257 230 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rpl7aP12970 266 aaKnown RBP11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Mmp13P33435 472 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rufy4Q3TYX8 563 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ctc1Q5SUQ9 1212 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tfap2bQ61313 459 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Churc1Q6DG52 112 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ddx31Q6NZQ2 687 aaKnown RBP11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tmc4Q7TQ65 694 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Dnajc6Q80TZ3 938 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Atg4cQ811C2 458 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Frmd4bQ920B0 1035 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ivns1abpQ920Q8 642 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Cox16Q9CR63 106 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Extl2Q9ES89 330 aa11.9□□□□□ -0.51
Topbp1-201ENSMUST00000035164 BcorQ8CGN4 1759 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 EloblA6PWE0 161 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ptpn20O55082 426 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 CidebO70303 219 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Arid5aQ3U108 590 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Scaf8Q6DID3 1268 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Nkiras1Q8CEC5 192 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Alg9Q8VDI9 611 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Setd3Q91WC0 594 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tmco4Q91WU4 631 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Txndc9Q9CQ79 226 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tsc1Q9EP53 1161 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Xpo7Q9EPK7 1087 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rnf19bA2A7Q9 732 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 4931406B18RikA2RSL7 367 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gm44503E9PYU5 387 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Anxa8O35640 327 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Snx3O70492 162 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rab6bP61294 208 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Psd3Q2PFD7 1037 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rap1gap2Q5SVL6 712 aaKnown RBP11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Capn11Q6J756 714 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gpatch2lQ6PE65 482 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Trpm4Q7TN37 1213 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Catsper3Q80W99 395 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Pak4Q8BTW9 593 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Clic5Q8BXK9 251 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Znf426Q8R1D1 550 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Extl3Q9WVL6 918 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rbm6S4R1W5 1118 aaKnown RBP11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 MtrA6H5Y3 1253 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Alkbh1P0CB42 389 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 GalcP54818 684 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 AaasP58742 546 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Arl13bQ640N2 427 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Orai3Q6P8G8 290 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Akap7Q7TN79 314 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ascc2Q91WR3 749 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Sppl3Q9CUS9 384 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Scn7aB1AYL1 1681 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Nedd1P33215 660 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Npas2P97460 816 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Shroom1Q5SX79 823 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Grik1Q60934 836 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tgm5Q9D7I9 724 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Sfmbt1Q9JMD1 863 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Dlc1Q9R0Z9 1092 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 SrcapA0A087WQ44 3271 aa11.89□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Cdr2lA2A6T1 465 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ace3D0G895 737 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gimd1E9PW74 217 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gm3460E9QAI8 215 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 ItgalP24063 1163 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Jade1Q6ZPI0 834 aaKnown RBP11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Usp6nlQ80XC3 819 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tesk2Q8VCT9 570 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Q9D2Q3 444 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Vav3Q9R0C8 847 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gadd45gQ9Z111 159 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 D430041D05RikF6ZGR6 1678 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Flvcr1B2RXV4 560 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ifi207E9Q3L4 978 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Sox10Q04888 466 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Klhdc9Q3USL1 350 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tdrd5Q5VCS6 1040 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Senp6Q6P7W0 1132 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Vmn2r26Q6TAC4 855 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Phactr3Q8BYK5 558 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gprc5cQ8K3J9 440 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Sec63Q8VHE0 760 aaKnown RBP11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tekt1Q9DAJ2 418 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tcirg1Q9JHF5 834 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Kifc1Q9QWT9 674 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 PodxlQ9R0M4 503 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ptpn4Q9WU22 926 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms