RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 SMIM35A0A1B0GVV1 85 aa13.06□□□□□ -0.32
PAX6-261ENST00000639943 KRIT1O00522 736 aa13.06□□□□□ -0.32
PAX6-261ENST00000639943 TNPO2O14787 897 aaKnown RBP13.06□□□□□ -0.32
PAX6-261ENST00000639943 COMTP21964 271 aa13.06□□□□□ -0.32
PAX6-261ENST00000639943 TNFRSF8P28908 595 aa13.06□□□□□ -0.32
PAX6-261ENST00000639943 PLA2G4AP47712 749 aa13.06□□□□□ -0.32
PAX6-261ENST00000639943 LIN9Q5TKA1 542 aa13.06□□□□□ -0.32
PAX6-261ENST00000639943 IFT20Q8IY31 132 aa13.06□□□□□ -0.32
PAX6-261ENST00000639943 ADAMTS10Q9H324 1103 aa13.06□□□□□ -0.32
PAX6-261ENST00000639943 CHORDC1Q9UHD1 332 aaPredicted RBP13.06□□□□□ -0.32
PAX6-261ENST00000639943 MBLAC1A4D2B0 266 aaPredicted RBP13.05□□□□□ -0.32
PAX6-261ENST00000639943 NFICP08651 508 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 KRT19P08727 400 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 PSEN2P49810 448 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 NOMO3P69849 1222 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 CASP8Q14790 479 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 PCBP1Q15365 356 aaKnown RBP eCLIP13.05□□□□□ -0.32
PAX6-261ENST00000639943 KIZQ2M2Z5 673 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 DCAF4L1Q3SXM0 396 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 JADE1Q6IE81 842 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 MON1BQ7L1V2 547 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 PHF13Q86YI8 300 aaPredicted RBP13.05□□□□□ -0.32
PAX6-261ENST00000639943 CD302Q8IX05 232 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 ZNF606Q8WXB4 792 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 ACAP3Q96P50 834 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 ZSWIM1Q9BR11 485 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 TLL2Q9Y6L7 1015 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 PASKQ96RG2 1323 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 IGHA2P01877 340 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 ATICP31939 592 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 ASPAP45381 313 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 SLC10A6Q3KNW5 377 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 ZNF667Q5HYK9 610 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 DCAF12L1Q5VU92 463 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 NT5DC4Q86YG4 428 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 C1orf127Q8N9H9 656 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 CD101Q93033 1021 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 RNPC3Q96LT9 517 aaKnown RBP13.05□□□□□ -0.32
PAX6-261ENST00000639943 FAM49AQ9H0Q0 323 aaPredicted RBP13.05□□□□□ -0.32
PAX6-261ENST00000639943 SIX4Q9UIU6 781 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 MROH7Q68CQ1 1323 aa13.05□□□□□ -0.32
PAX6-261ENST00000639943 CCDC66A2RUB6 948 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 FAM155AB1AL88 458 aaPredicted RBP13.04□□□□□ -0.32
PAX6-261ENST00000639943 HAS3O00219 553 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 SPOPO43791 374 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 GPR32O75388 356 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 FGGP02679 453 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 CYP2C9P11712 490 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 CD58P19256 250 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 CTNNA2P26232 953 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 MRPS25P82663 173 aaKnown RBP13.04□□□□□ -0.32
PAX6-261ENST00000639943 CRHR2Q13324 411 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 PPP2R5EQ16537 467 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 KLHL7Q8IXQ5 586 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 KATNAL1Q9BW62 490 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 AP1M1Q9BXS5 423 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 ACBD3Q9H3P7 528 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 GDF3Q9NR23 364 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 ADAM22Q9P0K1 906 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 C2CD2Q9Y426 696 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 TRIP12Q14669 1992 aaPredicted RBP13.04□□□□□ -0.32
PAX6-261ENST00000639943 MEFVO15553 781 aaPredicted RBP13.04□□□□□ -0.32
PAX6-261ENST00000639943 HEXIM1O94992 359 aaKnown RBP13.04□□□□□ -0.32
PAX6-261ENST00000639943 LSM8O95777 96 aaKnown RBP13.04□□□□□ -0.32
PAX6-261ENST00000639943 MYL3P08590 195 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 WEE2P0C1S8 567 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 RRM1P23921 792 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 GRM5P41594 1212 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 C1QBPQ07021 282 aaKnown RBP13.04□□□□□ -0.32
PAX6-261ENST00000639943 GPS2Q13227 327 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 TMEM132DQ14C87 1099 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 PASD1Q8IV76 773 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 ALG3Q92685 438 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 LENG1Q96BZ8 264 aaPredicted RBP13.04□□□□□ -0.32
PAX6-261ENST00000639943 BTBD6Q96KE9 485 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 BCO2Q9BYV7 579 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 SLITRK6Q9H5Y7 841 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 VIPAS39Q9H9C1 493 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 MRPL47Q9HD33 250 aaKnown RBP13.04□□□□□ -0.32
PAX6-261ENST00000639943 NXF1Q9UBU9 619 aaKnown RBP13.04□□□□□ -0.32
PAX6-261ENST00000639943 ANAPC7Q9UJX3 599 aa13.04□□□□□ -0.32
PAX6-261ENST00000639943 RAD51CO43502 376 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 ITGB3P05106 788 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 GLI1P08151 1106 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 CFHP08603 1231 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 MYBL2P10244 700 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 CTNNA1P35221 906 aaKnown RBP13.03□□□□□ -0.32
PAX6-261ENST00000639943 TNNT3P45378 269 aaPredicted RBP13.03□□□□□ -0.32
PAX6-261ENST00000639943 TM4SF4P48230 202 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 PEX5P50542 639 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 SCARA5Q6ZMJ2 495 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 CATSPER4Q7RTX7 472 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 AENQ8WTP8 325 aaKnown RBP13.03□□□□□ -0.32
PAX6-261ENST00000639943 KRT35Q92764 455 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 VRTNQ9H8Y1 702 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 PCDHA3Q9Y5H8 950 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 GOLGA6L10A0A0M3HER8 536 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 MYO1FO00160 1098 aa13.03□□□□□ -0.32
PAX6-261ENST00000639943 SART1O43290 800 aaKnown RBP13.03□□□□□ -0.32
PAX6-261ENST00000639943 P4HA1P13674 534 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms