RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 TXLNGYQ9BZA5 131 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 INO80BQ9C086 356 aaPredicted RBP13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 CENPHQ9H3R5 247 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 PDGFCQ9NRA1 345 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 PARP2Q9UGN5 583 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 ATP8A1Q9Y2Q0 1164 aa13.02□□□□□ -0.32
PHACTR4-206ENST00000632421 PROZP22891 400 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 RPL21P46778 160 aaKnown RBP13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 TRPC3Q13507 836 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 SGSM1Q2NKQ1 1148 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 ZNF568Q3ZCX4 644 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 TMEM63BQ5T3F8 832 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 ATF7IP2Q5U623 682 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 EFCAB12Q6NXP0 572 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 ZDHHC24Q6UX98 284 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 NIF3L1Q9GZT8 377 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 FZD8Q9H461 694 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 LRRC19Q9H756 370 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 GRHL1Q9NZI5 618 aa13.02□□□□□ -0.33
PHACTR4-206ENST00000632421 GJB1P08034 283 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 ATP1A2P50993 1020 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 CLCN3P51790 818 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 TFAMQ00059 246 aaKnown RBP13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 MAMLD1Q13495 774 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 FBXO25Q8TCJ0 367 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 MAIP1Q8WWC4 291 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 ZNF606Q8WXB4 792 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 UPF1Q92900 1129 aaKnown RBP eCLIP13.01□□□□□ -0.333e-8■■■■■ 29.1
PHACTR4-206ENST00000632421 ZNF668Q96K58 619 aaPredicted RBP13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 PTPN22Q9Y2R2 807 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 PASKQ96RG2 1323 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 EIF3HO15372 352 aaKnown RBP eCLIP13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 PPFIA4O75335 1185 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 TMEM191BP0C7N4 346 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.334e-7■□□□□ 9.7
PHACTR4-206ENST00000632421 GJA5P36382 358 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 SGO2Q562F6 1265 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 EMC10Q5UCC4 262 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 PLEKHA7Q6IQ23 1121 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 THNSL1Q8IYQ7 743 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 DDX27Q96GQ7 796 aaKnown RBP13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 PTPRHQ9HD43 1115 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 ERAP1Q9NZ08 941 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 PNMA3Q9UL41 463 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 ASAP2O43150 1006 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 ECEL1O95672 775 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 HOXC6P09630 235 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 CD58P19256 250 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 LLGL1Q15334 1064 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 ARMCX2Q7L311 632 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 PARVAQ9NVD7 372 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 MTRF1LQ9UGC7 380 aaKnown RBP13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 GRIN2DO15399 1336 aa13.01□□□□□ -0.33
PHACTR4-206ENST00000632421 B4GALT5O43286 388 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 PSTPIP1O43586 416 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 TNNC2P02585 160 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 CYP2C8P10632 490 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 KCNJ1P48048 391 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 TTC19Q6DKK2 380 aaPredicted RBP13□□□□□ -0.33
PHACTR4-206ENST00000632421 GTF3C2Q8WUA4 911 aaPredicted RBP13□□□□□ -0.33
PHACTR4-206ENST00000632421 CISHQ9NSE2 258 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 LSM8O95777 96 aaKnown RBP13□□□□□ -0.33
PHACTR4-206ENST00000632421 PMS2P54278 862 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 EIF3BP55884 814 aaKnown RBP13□□□□□ -0.33
PHACTR4-206ENST00000632421 OSTNP61366 133 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 MBTD1Q05BQ5 628 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 PDCLQ13371 301 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 ZNF699Q32M78 642 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 LDLRAD1Q5T700 205 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 RHOT1Q8IXI2 618 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 C1orf54Q8WWF1 131 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 ZBTB10Q96DT7 871 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 ANKRD36BP1Q96IX9 119 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 RNPEPQ9H4A4 650 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 EVPLQ92817 2033 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 B4GALT4O60513 344 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 C22orf31O95567 290 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 MMP8P22894 467 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 IFFO1Q0D2I5 559 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 PPP1R7Q15435 360 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 EEF1DP3Q658K8 133 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 SLCO2A1Q92959 643 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 SLC10A4Q96EP9 437 aa13□□□□□ -0.33
PHACTR4-206ENST00000632421 TLR3O15455 904 aaKnown RBP12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 BRD2P25440 801 aaKnown RBP12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 ARHGAP1Q07960 439 aa12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 LAMC2Q13753 1193 aa12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 EAPPQ56P03 285 aaPredicted RBP12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 ZNF484Q5JVG2 852 aa12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 AGBL2Q5U5Z8 902 aa12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 DAB2IPQ5VWQ8 1189 aa12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 CCDC50Q8IVM0 306 aa12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 GPRC5AQ8NFJ5 357 aa12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 FEZF2Q8TBJ5 459 aa12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 FAM129AQ9BZQ8 928 aa12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 PABPC3Q9H361 631 aaKnown RBP12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 TNFSF13BQ9Y275 285 aa12.99□□□□□ -0.33
PHACTR4-206ENST00000632421 CALB1P05937 261 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms